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Protein Overview: RPE1_METJA, RPOE...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..187] PSI-BLAST 34.69897 C-terminal domain of RNA polymerase II subunit RBP4 (RpoE); N-terminal, heterodimerisation domain of RBP4 (RpoE)

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • nucleic acid binding
  • 3.87899047526266 bayes_pls_golite062009
  • DNA binding
  • 3.47278447192966 bayes_pls_golite062009
  • binding
  • 3.35781855253373 bayes_pls_golite062009
  • RNA polymerase activity
  • 3.02898635943078 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 3.02898635943078 bayes_pls_golite062009
  • transcription regulator activity
  • 2.10110937001387 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.81524862921454 bayes_pls_golite062009
  • single-stranded DNA binding
  • 1.62996999055328 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.51215866188241 bayes_pls_golite062009
  • ribonuclease activity
  • 1.19236946227657 bayes_pls_golite062009
  • structural molecule activity
  • 1.16496993393687 bayes_pls_golite062009
  • transcription factor activity
  • 0.937752547283357 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.775557023642925 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.76825863122436 bayes_pls_golite062009
  • protein binding
  • 0.767256907671421 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.583085644017496 bayes_pls_golite062009
  • nuclease activity
  • 0.57381531077345 bayes_pls_golite062009
  • translation regulator activity
  • 0.31332179848255 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.263197317040851 bayes_pls_golite062009
  • translation initiation factor activity
  • 0.2080607201312 bayes_pls_golite062009
  • RNA binding
  • 0.18502033889261 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.125256208482441 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.109774918833391 bayes_pls_golite062009
  • chromatin binding
  • 0.0075451629397203 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle