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Protein Overview: gi|149034143, gi...

General Information:
Name(s) found: gi|157822125 [NCBI NR]
gi|149034143 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|157822125|ref|NP_001100766.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 [Rattus norvegicus] [NCBI NR]
  • gi|149034143|gb|EDL88913.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 (predicted) [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 1325 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    soluble fraction [UNKNOWN]
    transcription elongation factor complex [UNKNOWN]
    nucleolus [UNKNOWN]
    cellular_component [ND]
    nucleoplasm [UNKNOWN]
    Biological Process: DNA repair [UNKNOWN]
    biological_process [ND]
    response to X-ray [UNKNOWN]
    pyrimidine dimer repair [UNKNOWN]
    base-excision repair [UNKNOWN]
    transcription-coupled nucleotide-excision repair [UNKNOWN]
    activation of JNKK activity [UNKNOWN]
    activation of JUN kinase activity [UNKNOWN]
    DNA damage response, signal transduction resulting in induction of apoptosis [UNKNOWN]
    response to UV [UNKNOWN]
    response to superoxide [UNKNOWN]
    response to DNA damage stimulus [UNKNOWN]
    response to toxin [UNKNOWN]
    response to oxidative stress [UNKNOWN]
    photoreceptor cell maintenance [UNKNOWN]
    response to gamma radiation [UNKNOWN]
    response to UV-B [UNKNOWN]
    positive regulation of RNA elongation [UNKNOWN]
    Molecular Function: DNA binding [UNKNOWN][IEA]
    ATP binding [UNKNOWN][IEA]
    [NOT]DNA helicase activity [UNKNOWN]
    transcription elongation regulator activity [UNKNOWN]
    DNA-dependent ATPase activity [UNKNOWN]
    protein binding [UNKNOWN]
    protein C-terminus binding [UNKNOWN]
    protein N-terminus binding [UNKNOWN]
    helicase activity [IEA]
    chromatin binding [UNKNOWN]
    protein complex binding [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHEEIPNST QPQGQDWLPG QHVSADRDIP AGQETAGDSE AGKCLSSPSC DHGPSTSAEA  60
   61 CVLAATRWGP ALLHIDRHQI PAVEPSAQAL ELQGLGVDVY DQAVLEEGVL QQVDSAMHEA 120
  121 SRVAQRADAE KEYQSVLDDL MSCTTSLRQI NKIIEQLSPQ AASNRDINRK LDSVKRQKYN 180
  181 KEQQLKKITA KQKRLQAILG GAEVHVELDH GSLEEEDAEP GPSCLGSMLM PAQESAWEEL 240
  241 IRTGQMTPFG TPAPQKQEKK PRKIMLNEAS GFEKYLADQA QLSFKRKKQA ANKRTAKKAV 300
  301 VVSESSRGPN ETKPNQRSQA LSQTDKRLKK HIRKLQRRAL QFQGKVGLQR GKRPLEPEER 360
  361 PGAEGDTEAV LSSDDISYEL KPLRKGQKYE KKVPVQEIDD DFFPSSEEED EAVEGRGGGR 420
  421 KVSRRPDDGD EDYYKQRLRR WNRLRLQDKE KLKLEDDSEE SDAEFDEGFK VPGFLFKKLF 480
  481 KFEGLGPTLI VCPTTVMHQW VKEFHTWWPP FRVAILHETG SCAHRKERLV RDIVHCHGVL 540
  541 ITSYSYIRLM QDDISRHDWH YVILDEGHKI RNPNAAVTLA CKQNNLRELW SLFDFTFPGK 600
  601 LGTLPVFMEQ FSVPITMGGY SNASPVQVKT AYKCACVLRD TINPYLLRRM KSDVKMSLSL 660
  661 PDKNEQVLFC RLTDEQHKVY QNFIDSKAVY RILNGENQIF SGLVALRKIC NHPDLFSGGP 720
  721 KNTSALPEDG LEEEQFGYWK RSGKMIVVES LLKIWHKQGQ RVLLFSQSRQ MLHILEVFLR 780
  781 AHKYSYLKMD GTTTIASRQP LITKYNEDTS IFVFLLTTRV GGLGVNLTGA NRVIIYDPDW 840
  841 NPSTDTQARE RAWRIGQKKQ VTVYRLLTAG TIEEKIYHRQ IFKQFLTNRV LKDPKQRRFF 900
  901 KSNDLYELFT LTSPDASQGT ETSAIFAGTG SNIQTLKCHF KKRTPPVLQM DPKRKKPLVS 960
  961 DTSVNGATVM EEKSQGSGAT GSVPSTESGP LKSDRHTDGS RASSVGFGEE ADAGSTLEHL1020
 1021 SGLSGDSPAV DHTSRLSAVA STSEKQGSSY EGECCQAQTG PVHLSEQTEG HFSKHKSKRK1080
 1081 HDAAEEETTE KCPQPKQKAK NSRHHRDAKF EGTRVPHLVK KRRYHQQTTE QESGAKDRSS1140
 1141 DDYVLEKLFK KSVGVHSVVK HDAIIDGSSP DYVLVEAEAN RVAQDALKAL RLSRQQCLGA1200
 1201 TSGVPTWTGH RGISGAPAGV KMRARNHMIL PERLESDGEQ LAGAAAAAAP PCSTEHDALL1260
 1261 VDMRNFIAFQ AQVDGQASTQ EILQAFESKL SVAQSCVFRE LLRNLCNFHR TPGGEGIWKL1320
 1321 KPEYC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle