YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|151945749

General Information:
Name(s) found: gi|151945749 [NCBI NR]
Description(s) found:
  • gi|151945749|gb|EDN63990.1| phosphoribosylaminoimidazole carboxylase [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRTVGILG GGQLGRMIVE AANRLNIKTV ILDAENSPAK QISNSNDHVN GSFSNPLDIE  60
   61 KLAEKCDVLT IEIEHVDVPT LKNLQVKHPK LKIYPSPETI RLIQDKYIQK EHLIKNGIAV 120
  121 TQSVPVEQAS ETSLLNVGRD LGFPFVLKSR TLAYDGRGNF VVKNKEMIPE ALEVLKDRPL 180
  181 YAEKWAPFTK ELAVMIVRSV NGLVFSYPIV ETIHKDNICD LCYAPARVPD SVQLKAKLLA 240
  241 ENAIKSFPGC GIFGVEMFYL ETGELLINEI APRPHNSGHY TIDACVTSQF EAHLRSILDL 300
  301 PMPKNFTSFS TITTNAIMLN VLGDKHTKDK ELETCERALA TPGSSVYLYG KESRPNRKVG 360
  361 HINIIASSMA ECEQRLNYIT GRTDIPIKIS VAQKLDLEAM VKPLVGIIMG SDSDLPVMSA 420
  421 ACAVLKDFGV PFEVTIVSAH RTPHRMSAYA ISASKRGIKT IIAGAGGAAH LPGMVAAMTP 480
  481 LPVIGVPVKG SCLDGVDSLH SIVQMPRGVP VATVAINNST NAALLAVRLL GAYDSSYTTK 540
  541 MEQFLLKQEE EVLVKAQKLE TVGYEAYLEN K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 342.917458 N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2
    2 View Details [123..185] PSI-BLAST 342.917458 N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2
    3 View Details [186..393] PSI-BLAST 342.917458 N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2
    4 View Details [394..571] PSI-BLAST 304.045757 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoribosylaminoimidazole carboxylase activity
    		•  8.30252180826751 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  4.46679646341684 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  2.99262646198755 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  2.80055235272563 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  2.72231827182887 bayes_pls_golite062009
  • catalytic activity
    		•  1.681309422157 bayes_pls_golite062009
  • phosphoribosylamine-glycine ligase activity
    		•  1.37477732460326 bayes_pls_golite062009
  • phosphoribosylaminoimidazolecarboxamide formyltransferase activity
    		•  1.20917335424321 bayes_pls_golite062009
  • ligase activity
    		•  1.13657217096051 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.11645327303429 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.01641658620582 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.94663663480966 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.730894973410499 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  0.56822429064158 bayes_pls_golite062009
  • binding
    		•  0.552939485505354 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  0.344740566585736 bayes_pls_golite062009
  • protein binding
    		•  0.259473641428437 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.258234666901931 bayes_pls_golite062009
  • glutathione synthase activity
    		•  0.0685848191991462 bayes_pls_golite062009
    2
    Term Confidence Notes
  • phosphoribosylaminoimidazole carboxylase activity
    		•  12.126616405613 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  8.23768576957333 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.36590642968819 bayes_pls_golite062009
  • catalytic activity
    		•  1.94758748334979 bayes_pls_golite062009
  • lyase activity
    		•  0.685887227538264 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle