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Protein Overview: AMIB_ECOLI

General Information:
Name(s) found: AMIB_ECOLI [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • N-acetylmuramoyl-L-alanine amidase amiB precursor (EC 3.5.1.28) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMYRIRNWLV ATLLLLCTPV GAATLSDIQV SNGNQQARIT LSFIGDPDYA FSHQSKRTVA  60
   61 LDIKQTGVIQ GLPLLFSGNN LVKAIRSGTP KDAQTLRLVV DLTENGKTEA VKRQNGSNYT 120
  121 VVFTINADVP PPPPPPPVVA KRVETPAVVA PRVSEPARNP FKTESNRTTG VISSNTVTRP 180
  181 AARATANTGD KIIIAIDAGH GGQDPGAIGP GGTREKNVTI AIARKLRTLL NDDPMFKGVL 240
  241 TRDGDYFISV MGRSDVARKQ NANFLVSIHA DAAPNRSATG ASVWVLSNRR ANSEMASWLE 300
  301 QHEKQSELLG GAGDVLANSQ SDPYLSQAVL DLQFGHSQRV GYDVATSMIS QLQRIGEIHK 360
  361 RRPEHASLGV LRSPDIPSVL VETGFISNNS EERLLASDDY QQQLAEAIYK GLRNYFLAHP 420
  421 MQSAPQGATA QTASTVTTPD RTLPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] MSA 21.301996 View MSA. No confident structure predictions are available.
    2 View Details [187..445] PSI-BLAST 22.221849 Structure of the catalytic domain of CwlV, N-acetylmuramoyl-L-alanine amidase from Bacillus(Paenibacillus) polymyxa var.colistinus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • N-acetylmuramoyl-L-alanine amidase activity
    		•  3.38642352843344 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  2.43845541073558 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.33105751789147 bayes_pls_golite062009
  • hydrolase activity
    		•  1.7824202462173 bayes_pls_golite062009
  • catalytic activity
    		•  1.76936806579991 bayes_pls_golite062009
  • peptidase activity
    		•  1.69812537802871 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.41029347724469 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.82896398764377 bayes_pls_golite062009
  • metallopeptidase activity
    		•  0.1586028474273 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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