General Information: |
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Name(s) found: |
nhr-41 /
CE37054
[WormBase]
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Description(s) found:
Found 14 descriptions. SHOW ALL |
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Organism: | Caenorhabditis elegans |
Length: | 657 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IEA]
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Biological Process: |
regulation of transcription, DNA-dependent
[IEA]
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Molecular Function: |
DNA binding
[IEA]
transcription factor activity [IEA] zinc ion binding [IEA] steroid hormone receptor activity [IEA] sequence-specific DNA binding [IEA] steroid binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MYTLPKCSDH PHRPLILENS TSSTGLIFAE SQASASHQTW INMTLGDPCS VEQPPPPPID 60 61 FSRSLIAPTA IKQESHLIPS TPGTPTAFQP PQHANTPIPG IQPNLFNPAI MAAQLNVFSN 120 121 PQLMAMMQAT RNPLLGHPSV VGPPMMPNII QQLNALRNVQ LSNANTMANL QNMSSSPKHT 180 181 NGSSERSENC GELCVVCGDK ASGRHYGAVS CEGCKGFFKR SIRKRIGYVC RSQKDCPVTK 240 241 FHRNRCQYCR LRKCLSMGMR SESVQAERRP VNNSSMLCNN DNNQQNTTPE HLSPNLLLSL 300 301 VKLEHETKLG GLEALIKPGS PVMLQNTQDY MDVKRESIGE DEMTVIGLVP PSASPTSSGV 360 361 GSSSSISDDS GPIYTSERAR FEISVPLNTQ NPRNHQYISE ITTRLLFLTV HFVKDSRVSL 420 421 RTSTMEGLLK SKWCDLYILA LMQTADKIKL GQLLDNLTNQ MAMGMECGQY SAEKFEKISE 480 481 QMQRLLQLSQ LFASRELTAV EYAYLKMISF TAQDLPSSMA SPETRSVNQM ASQELFEYVS 540 541 SSKSTQNHMS NEHINVDDST SEDNDTHVTS QQSSVNIAAE RFSRILQLLP CLRWFDPATI 600 601 VEIFFSGLIG PMSIETIIPF VLQMNLMSFF DQKMELGSGG ASDTLSTSSL SEMMNNQ |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..185] | 11.349997 | View MSA. No confident structure predictions are available. | |
2 | View Details | [186..276] | 29.09691 | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter | |
3 | View Details | [277..577] | 38.39794 | Thyroid hormone receptor beta (TR-beta) | |
4 | View Details | [578..657] | 56.69897 | Crystal structure of estrogen receptor beta complexed with 1-chloro-6-(4-hydroxy-phenyl)-naphthalen-2-ol |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 |
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4 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.62 |
Source: Reynolds et al. (2008)