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Protein Overview: BAME1_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..327] PSI-BLAST 51.221849 Polygalacturonase inhibiting protein PGIP
2 View Details [328..372] PSI-BLAST 25.0 Reticulon 4 receptor (Nogo-66 receptor, Ngr)
3 View Details [373..670] FFAS03 6.61 Polygalacturonase inhibiting protein PGIP
4 View Details [671..1003] PSI-BLAST 69.0 No description for 2qkwB was found.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • receptor activity
  • 3.83269261081332 bayes_pls_golite062009
  • transmembrane receptor activity
  • 3.75945815830294 bayes_pls_golite062009
  • G-protein coupled receptor activity
  • 3.09281229196379 bayes_pls_golite062009
  • molecular transducer activity
  • 2.99319600166105 bayes_pls_golite062009
  • signal transducer activity
  • 2.99319600166105 bayes_pls_golite062009
  • binding
  • 1.87302803330255 bayes_pls_golite062009
  • receptor binding
  • 1.66628371061052 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
  • 1.50579173120225 bayes_pls_golite062009
  • glycosaminoglycan binding
  • 1.47047886487324 bayes_pls_golite062009
  • protein kinase activity
  • 1.43632437878638 bayes_pls_golite062009
  • collagen binding
  • 1.31548082127061 bayes_pls_golite062009
  • nucleic acid binding
  • 1.31434688144553 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.12585418084562 bayes_pls_golite062009
  • kinase activity
  • 1.11577341189523 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
  • 0.925064573334258 bayes_pls_golite062009
  • protein binding
  • 0.646159692466759 bayes_pls_golite062009
  • protein-hormone receptor activity
  • 0.42902267001067 bayes_pls_golite062009
  • extracellular matrix binding
  • 0.347753255340891 bayes_pls_golite062009
  • heparin binding
  • 0.342156171222462 bayes_pls_golite062009
  • polysaccharide binding
  • 0.34063289254939 bayes_pls_golite062009
  • pattern binding
  • 0.339536765321749 bayes_pls_golite062009
  • protein tyrosine kinase activity
  • 0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
  • 0.154501444195573 bayes_pls_golite062009
  • growth factor binding
  • 0.0358215683345522 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • receptor activity
  • 3.63203017549127 bayes_pls_golite062009
  • transmembrane receptor activity
  • 3.56258215414028 bayes_pls_golite062009
  • G-protein coupled receptor activity
  • 2.86089370110523 bayes_pls_golite062009
  • molecular transducer activity
  • 2.85996487503213 bayes_pls_golite062009
  • signal transducer activity
  • 2.85996487503213 bayes_pls_golite062009
  • binding
  • 1.88645638630371 bayes_pls_golite062009
  • receptor binding
  • 1.62537779185792 bayes_pls_golite062009
  • protein kinase activity
  • 1.44543786404772 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
  • 1.39264933048518 bayes_pls_golite062009
  • nucleic acid binding
  • 1.33922283636437 bayes_pls_golite062009
  • glycosaminoglycan binding
  • 1.31428931575251 bayes_pls_golite062009
  • collagen binding
  • 1.2024797718455 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.18001333603647 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.14774707593524 bayes_pls_golite062009
  • kinase activity
  • 1.13356668527648 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
  • 0.831155397246448 bayes_pls_golite062009
  • protein binding
  • 0.629660151009639 bayes_pls_golite062009
  • heparin binding
  • 0.277971593709408 bayes_pls_golite062009
  • pattern binding
  • 0.218511437528696 bayes_pls_golite062009
  • polysaccharide binding
  • 0.201838575206714 bayes_pls_golite062009
  • protein tyrosine kinase activity
  • 0.176363297428464 bayes_pls_golite062009
  • enzyme regulator activity
  • 0.143284785584541 bayes_pls_golite062009
  • extracellular matrix binding
  • 0.137428338289148 bayes_pls_golite062009
  • protein-hormone receptor activity
  • 0.0124918555036033 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle