YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|6735375, gi|1...

General Information:
Name(s) found: gi|6735375 [NCBI NR]
gi|15231075 [NCBI NR]
gi|11282424 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|6735375|emb|CAB68196.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231075|ref|NP_191417.1| hydrolase [Arabidopsis thaliana] [NCBI NR]
  • pir||T45678 hypothetical protein F14P22.170 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KNSTTDDVPE SAPLEGYFLR YRWYRVQSDK  60
   61 KVTICSVHPT EQATLQCVFC SKRRSLVPKS YHCSPKCFTD AWQHHRTLHE RAAAENNANE 120
  121 DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT 180
  181 PTADDISHVL KFECVVANAE TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD 240
  241 QDARIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWP YRRQNLLREI VGYRADVVCL 300
  301 QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVLSGSTSAI DGCATFFRRD RFSHVKKYDV 360
  361 EFNKAAQSLT DALIPQAQKR TALNRLVKDN IALIVVLEAK FGNQPTDPSG KRQLICVVLA 420
  421 NTHVNVQQDL KDVKLWQVHT LLKGLEKIAA SADIPMLVCG DFNTLPGSAP HTLLVMGKVD 480
  481 PMHPDLAVDP LNILRPHTKL THQLPLVSAY SSFVRKGIMG LGLEQHRRRI DLNTNEPLFT 540
  541 NCTRDFIGTH DYIFYTADTL MVESLLELLD EDGLRKDTAL PSPEWSSNHI ALLAEFRCTP 600
  601 RTRRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] PSI-BLAST 8.39794 No description for 2id5A was found.
    2 View Details [269..605] PSI-BLAST 32.09691 EXONUCLEASE III FROM ESCHERICHIA COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  3.28400034252781 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  3.04161110413795 bayes_pls_golite062009
  • DNA binding
    		•  2.38216646754749 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.37867140645121 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.37728600449241 bayes_pls_golite062009
  • nuclease activity
    		•  1.78432551160775 bayes_pls_golite062009
  • catalytic activity
    		•  1.76511376991978 bayes_pls_golite062009
  • binding
    		•  1.74593496417303 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  1.6713040226181 bayes_pls_golite062009
  • transcription coactivator activity
    		•  1.51022821676155 bayes_pls_golite062009
  • exonuclease activity
    		•  1.44893971411928 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  1.25010124971419 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.934548175624486 bayes_pls_golite062009
  • transcription activator activity
    		•  0.885026804340494 bayes_pls_golite062009
  • transcription factor binding
    		•  0.77254170640454 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.738975226345995 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  0.73001958440393 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.58884884939295 bayes_pls_golite062009
  • protein binding
    		•  0.476649214025345 bayes_pls_golite062009
  • endonuclease activity
    		•  0.288539805949629 bayes_pls_golite062009
  • inositol or phosphatidylinositol phosphatase activity
    		•  0.228910502815798 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.100365481550461 bayes_pls_golite062009
  • phosphatase activity
    		•  0.00559251346312178 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle