| Protein: | gi|6735375, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6735375, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
436.0 | [0..1] | [604..1] |
|
Region A: Residues: [1-268] |
1 11 21 31 41 51
| | | | | |
1 MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KNSTTDDVPE SAPLEGYFLR YRWYRVQSDK 60
61 KVTICSVHPT EQATLQCVFC SKRRSLVPKS YHCSPKCFTD AWQHHRTLHE RAAAENNANE 120
121 DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT 180
181 PTADDISHVL KFECVVANAE TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD 240
241 QDARIQSAGS FTVLSYNILS DTSASSDL
|
| Detection Method: |  |
| Confidence: | 8.39794 |
| Match: | 2id5A |
| Description: | No description for 2id5A was found. |
|
Region A: Residues: [269-605] |
1 11 21 31 41 51
| | | | | |
1 YSYCPPWALS WPYRRQNLLR EIVGYRADVV CLQEVQSDHF HEIFAPELDK HGYQALYKRK 60
61 TNEVLSGSTS AIDGCATFFR RDRFSHVKKY DVEFNKAAQS LTDALIPQAQ KRTALNRLVK 120
121 DNIALIVVLE AKFGNQPTDP SGKRQLICVV LANTHVNVQQ DLKDVKLWQV HTLLKGLEKI 180
181 AASADIPMLV CGDFNTLPGS APHTLLVMGK VDPMHPDLAV DPLNILRPHT KLTHQLPLVS 240
241 AYSSFVRKGI MGLGLEQHRR RIDLNTNEPL FTNCTRDFIG THDYIFYTAD TLMVESLLEL 300
301 LDEDGLRKDT ALPSPEWSSN HIALLAEFRC TPRTRRG
|
| Detection Method: | |
| Confidence: | 32.09691 |
| Match: | 1akoA |
| Description: | EXONUCLEASE III FROM ESCHERICHIA COLI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 3.28400034252781 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 3.04161110413795 | bayes_pls_golite062009 |
| DNA binding | 2.38216646754749 | bayes_pls_golite062009 |
| transcription regulator activity | 2.37867140645121 | bayes_pls_golite062009 |
| nucleic acid binding | 2.37728600449241 | bayes_pls_golite062009 |
| nuclease activity | 1.78432551160775 | bayes_pls_golite062009 |
| catalytic activity | 1.76511376991978 | bayes_pls_golite062009 |
| binding | 1.74593496417303 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.6713040226181 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.51022821676155 | bayes_pls_golite062009 |
| exonuclease activity | 1.44893971411928 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.25010124971419 | bayes_pls_golite062009 |
| ribonuclease activity | 0.934548175624486 | bayes_pls_golite062009 |
| transcription activator activity | 0.885026804340494 | bayes_pls_golite062009 |
| transcription factor binding | 0.77254170640454 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.738975226345995 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.73001958440393 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58884884939295 | bayes_pls_golite062009 |
| protein binding | 0.476649214025345 | bayes_pls_golite062009 |
| endonuclease activity | 0.288539805949629 | bayes_pls_golite062009 |
| inositol or phosphatidylinositol phosphatase activity | 0.228910502815798 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.100365481550461 | bayes_pls_golite062009 |
| phosphatase activity | 0.00559251346312178 | bayes_pls_golite062009 |
