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Protein Overview: ATL55_ARATH

General Information:
Name(s) found: ATL55_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: positive regulation of programmed cell death [IMP]
    response to chitin [IEP]
    Molecular Function: ubiquitin-protein ligase activity [IDA]
    zinc ion binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNHRKMLL SCLQFKDLRF CFRQYPPPPP PPPPPRELSL LLPTSICVVG SIILFLFLVF  60
   61 FLYLHITQQR RISAASVTPG DTNQQEDEDE TEERDFSDFH HVWQIPTVGL HRSAINSITV 120
  121 VGFKKGEGII DGTECSVCLN EFEEDESLRL LPKCSHAFHL NCIDTWLLSH KNCPLCRAPV 180
  181 LLITEPPHQE TETNHQPDSE SSNDLRGRQD SSRSRRNHNI FLPRAQSDLA NYCGSGRVEN 240
  241 VRRSFSIGGS LSLCDGINNA TRSGRQFYTS FSANLFSSSR RVRNEQPIPQ NQMPSVTGNT 300
  301 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] deduced N/A No confident structure predictions are available.
    2 View Details [125..182] PSI-BLAST 14.522879 EL5 RING-H2 domain
    3 View Details [183..301] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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