YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL55_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNHRKMLL SCLQFKDLRF CFRQYPPPPP PPPPPRELSL LLPTSICVVG SIILFLFLVF  60
   61 FLYLHITQQR RISAASVTPG DTNQQEDEDE TEERDFSDFH HVWQIPTVGL HRSAINSITV 120
  121 VGFKKGEGII DGTECSVCLN EFEEDESLRL LPKCSHAFHL NCIDTWLLSH KNCPLCRAPV 180
  181 LLITEPPHQE TETNHQPDSE SSNDLRGRQD SSRSRRNHNI FLPRAQSDLA NYCGSGRVEN 240
  241 VRRSFSIGGS LSLCDGINNA TRSGRQFYTS FSANLFSSSR RVRNEQPIPQ NQMPSVTGNT 300
  301 S

Type	Start	End	Confidence
Cytoplasmic	1	40	0.77
Transmembrane Helix	41	64	0.91
Non-Cytoplasmic	65	301	0.78