| Protein: | ATL55_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 301 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL55_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
139.0 | [0..23] | [276..21] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MAFNHRKMLL SCLQFKDLRF CFRQYPPPPP PPPPPRELSL LLPTSICVVG SIILFLFLVF 60
61 FLYLHITQQR RISAASVTPG DTNQQEDEDE TEERDFSDFH HVWQIPTVGL HRSAINSITV 120
121 VGFK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-182] |
1 11 21 31 41 51
| | | | | |
1 KGEGIIDGTE CSVCLNEFEE DESLRLLPKC SHAFHLNCID TWLLSHKNCP LCRAPVLL
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [183-301] |
1 11 21 31 41 51
| | | | | |
1 ITEPPHQETE TNHQPDSESS NDLRGRQDSS RSRRNHNIFL PRAQSDLANY CGSGRVENVR 60
61 RSFSIGGSLS LCDGINNATR SGRQFYTSFS ANLFSSSRRV RNEQPIPQNQ MPSVTGNTS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
