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Protein Overview: VPED_ARATH

General Information:
Name(s) found: VPED_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Vacuolar-processing enzyme delta-isozyme OS=Arabidopsis thaliana GN=dVPE PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [IDA]
    Biological Process: vacuolar protein processing [ISS]
    proteolysis [ISS]
    seed coat development [IMP]
    programmed cell death [IMP]
    Molecular Function: cysteine-type endopeptidase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPLGHFQI LVFLHALLIF SAESRKTQLL NDNDVESSDK SAKGTRWAVL VAGSNEYYNY  60
   61 RHQADICHAY QILRKGGLKD ENIIVFMYDD IAFSSENPRP GVIINKPDGE DVYKGVPKDY 120
  121 TKEAVNVQNF YNVLLGNESG VTGGNGKVVK SGPNDNIFIY YADHGAPGLI AMPTGDEVMA 180
  181 KDFNEVLEKM HKRKKYNKMV IYVEACESGS MFEGILKKNL NIYAVTAANS KESSWGVYCP 240
  241 ESYPPPPSEI GTCLGDTFSI SWLEDSDLHD MSKETLEQQY HVVKRRVGSD VPETSHVCRF 300
  301 GTEKMLKDYL SSYIGRNPEN DNFTFTESFS SPISNSGLVN PRDIPLLYLQ RKIQKAPMGS 360
  361 LESKEAQKKL LDEKNHRKQI DQSITDILRL SVKQTNVLNL LTSTRTTGQP LVDDWDCFKT 420
  421 LVNSFKNHCG ATVHYGLKYT GALANICNMG VDVKQTVSAI EQACSM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..316] FFAS03 1.58 Caspase-8
    2 View Details [317..466] MSA 5.054984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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