| Protein: | VPED_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPED_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
738.0 | [0..5] | [464..1] |
|
Region A: Residues: [1-316] |
1 11 21 31 41 51
| | | | | |
1 MSSPLGHFQI LVFLHALLIF SAESRKTQLL NDNDVESSDK SAKGTRWAVL VAGSNEYYNY 60
61 RHQADICHAY QILRKGGLKD ENIIVFMYDD IAFSSENPRP GVIINKPDGE DVYKGVPKDY 120
121 TKEAVNVQNF YNVLLGNESG VTGGNGKVVK SGPNDNIFIY YADHGAPGLI AMPTGDEVMA 180
181 KDFNEVLEKM HKRKKYNKMV IYVEACESGS MFEGILKKNL NIYAVTAANS KESSWGVYCP 240
241 ESYPPPPSEI GTCLGDTFSI SWLEDSDLHD MSKETLEQQY HVVKRRVGSD VPETSHVCRF 300
301 GTEKMLKDYL SSYIGR
|
| Detection Method: |  |
| Confidence: | 1.58 |
| Match: | 1i4eB |
| Description: | Caspase-8 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [317-466] |
1 11 21 31 41 51
| | | | | |
1 NPENDNFTFT ESFSSPISNS GLVNPRDIPL LYLQRKIQKA PMGSLESKEA QKKLLDEKNH 60
61 RKQIDQSITD ILRLSVKQTN VLNLLTSTRT TGQPLVDDWD CFKTLVNSFK NHCGATVHYG 120
121 LKYTGALANI CNMGVDVKQT VSAIEQACSM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
