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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPED_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPLGHFQI LVFLHALLIF SAESRKTQLL NDNDVESSDK SAKGTRWAVL VAGSNEYYNY  60
   61 RHQADICHAY QILRKGGLKD ENIIVFMYDD IAFSSENPRP GVIINKPDGE DVYKGVPKDY 120
  121 TKEAVNVQNF YNVLLGNESG VTGGNGKVVK SGPNDNIFIY YADHGAPGLI AMPTGDEVMA 180
  181 KDFNEVLEKM HKRKKYNKMV IYVEACESGS MFEGILKKNL NIYAVTAANS KESSWGVYCP 240
  241 ESYPPPPSEI GTCLGDTFSI SWLEDSDLHD MSKETLEQQY HVVKRRVGSD VPETSHVCRF 300
  301 GTEKMLKDYL SSYIGRNPEN DNFTFTESFS SPISNSGLVN PRDIPLLYLQ RKIQKAPMGS 360
  361 LESKEAQKKL LDEKNHRKQI DQSITDILRL SVKQTNVLNL LTSTRTTGQP LVDDWDCFKT 420
  421 LVNSFKNHCG ATVHYGLKYT GALANICNMG VDVKQTVSAI EQACSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle