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Protein Overview: XCP1_ARATH

General Information:
Name(s) found: XCP1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T06122 cysteine proteinase (EC 3.4.22.-) F23E12.90 - Arabidopsis thaliana [NCBI NR]
  • gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags: Precursor [NCBI NR]
  • gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana] [NCBI NR]
  • gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana] [NCBI NR]
  • gi|18418684|ref|NP_567983.1| XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase [Arabidopsis thaliana] [NCBI NR]
  • Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 [Swiss-Prot]
  • (O65493) Cysteine proteinase-like protein (Papain-type cysteine endopeptidase XCP1) (Hypothetical protein At4g35350) [athaliana3702.FASTAC.txt]
  • putative cysteine proteinase [Arabidopsis thaliana]gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana]gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana]gi|7270487|emb|CAB80252.1| cysteine proteinase-like pr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Xylem cysteine proteinase 1 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: XCP1 | XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type peptidase | chr4:16810534-16811880 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Xylem cysteine proteinase 1 precursor (AtXCP1) [nr-271106-contam.fasta]
  • putative cysteine proteinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cysteine proteinase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: XCP1 | xylem cysteine peptidase 1 | chr4:16810529-16811875 FORWARD LENGTH=355 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    plant-type vacuole [IDA]
    Biological Process: proteolysis [ISS]
    developmental programmed cell death [IMP]
    Molecular Function: cysteine-type endopeptidase activity [IEA]
    cysteine-type peptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK  60
   61 AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA DLTHEEFKGR YLGLAKPQFS 120
  121 RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN 180
  181 LSSLSEQELI DCDTTFNSGC NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV 240
  241 ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA 300
  301 AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..355] PSI-BLAST 72.69897 Caricain (protease omega)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  4.90619850296986 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.64381885397949 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.75054525912786 bayes_pls_golite062009
  • hydrolase activity
    		•  3.74079711298952 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • binding
    		•  1.49113376575534 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.12653729823589 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • protein binding
    		•  0.874003454509364 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.649171767629235 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.59115205419466 bayes_pls_golite062009
  • kininogen binding
    		•  0.41283715939055 bayes_pls_golite062009
  • signal transducer activity
    		•  0.26868506520228 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.26868506520228 bayes_pls_golite062009
  • structural molecule activity
    		•  0.102555314244558 bayes_pls_golite062009
  • tubulin binding
    		•  0.0482209771629902 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009
  • microtubule binding
    		•  0.00635493133568055 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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