Protein Overview: SKP1B_ARATH

General Information:
Name(s) found:	SKP1B_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9757964\|dbj\|BAB08452.1\| UIP2 [Arabidopsis thaliana] [NCBI NR] gi\|71153765\|sp\|Q9FHW7.1\|SKP1B_ARATH RecName: Full=SKP1-like protein 1B; AltName: Full=SKP1-like 2; AltName: Full=UFO-binding protein 2 [NCBI NR] gi\|3068809\|gb\|AAC14445.1\| Skp1 homolog [Arabidopsis thaliana] [NCBI NR] gi\|28466911\|gb\|AAO44064.1\| At5g42190 [Arabidopsis thaliana] [NCBI NR] gi\|18422184\|ref\|NP_568603.1\| ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR] gi\|110743841\|dbj\|BAE99755.1\| UIP2 [Arabidopsis thaliana] [NCBI NR] SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1 [Swiss-Prot] (Q9FHW7) UIP2 (At5g42190) [athaliana3702.FASTAC.txt] UIP2 [Arabidopsis thaliana]gi\|28466911\|gb\|AAO44064.1\| At5g42190 [Arabidopsis thaliana]gi\|3068809\|gb\|AAC14445.1\| Skp1 homolog [Arabidopsis thaliana]gi\|18422184\|ref\|NP_568603.1\| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At2) / UFO-binding protei [nrdb_11152004_Chlamydomonas] Tax_Id=3702 SKP1-like protein 1B [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: ASK2, SKP1B \| ASK2 (ARABIDOPSIS SKP1-LIKE 2); ubiquitin-protein ligase \| chr5:16871723-16872744 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] ASK2 (ARABIDOPSIS SKP1-LIKE 2); ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta] UIP2 [Arabidopsis thaliana] [nr-271106-contam.fasta] SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2) [nr-271106-contam.fasta] Skp1 homolog [Arabidopsis thaliana] [nr-271106-contam.fasta] At5g42190 [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: ASK2, SKP1B \| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein \| chr5:16854495-16855516 REVERSE LENGTH=171 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	171 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [NAS] SCF ubiquitin ligase complex [NAS]
Biological Process:	embryonic development ending in seed dormancy [IGI] ubiquitin-dependent protein catabolic process [TAS]
Molecular Function:	ubiquitin-protein ligase activity [ISS] protein binding [IPI]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVRKITLK SSDGENFEID EAVALESQTI KHMIEDDCTD NGIPLPNVTS KILSKVIEYC  60
   61 KRHVEAAEKS ETTADAAAAT TTTTVASGSS DEDLKTWDSE FIKVDQGTLF DLILAANYLN 120
  121 IKGLLDLTCQ TVADMIKGKT PEEIRKTFNI KNDFTPEEEE EVRRENQWAF E

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..171]	PSI-BLAST	57.39794	No description for 2p1mA was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: SKP1B_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: