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Protein Overview: DTX54_ARATH

General Information:
Name(s) found: DTX54_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7239514|gb|AAF43240.1|AC012654_24 Contains similarity to the ZF14 mRNA from Arabidopsis thaliana gb|AB028198; It is a member of the uncharacterized membrane protein family PF|01554 [NCBI NR]
  • gi|29468190|gb|AAO85439.1| NIC2 [Arabidopsis thaliana] [NCBI NR]
  • pir||D96741 hypothetical protein F17M19.2 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217599|ref|NP_177332.1| MATE efflux family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324538|gb|AAG52224.1|AC021665_7 hypothetical protein; 7233-4794 [Arabidopsis thaliana] [NCBI NR]
  • Protein DETOXIFICATION 54 OS=Arabidopsis thaliana GN=DTX54 PE=2 SV=1 [Swiss-Prot]
  • (Q9LE20) F14O23.25 protein (F17M19.2 protein) (NIC2) [athaliana3702.FASTAC.txt]
  • NIC2 [Arabidopsis thaliana]gi|7239514|gb|AAF43240.1| Contains similarity to the ZF14 mRNA from Arabidopsis thaliana gb|AB028198; It is a member of the uncharacterized membrane protein family PF|01554gi|25406127|pir||D96741 hypothetical protein F17M19.2 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MATE efflux family protein | chr1:27036118-27038557 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Contains similarity to the ZF14 mRNA from Arabidopsis thaliana gb|AB028198; It is a member of the uncharacterized membrane protein family PF|01554 [nr-271106-contam.fasta]
  • NIC2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein; 7233-4794 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • antiporter/ drug transporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | MATE efflux family protein | chr1:27032456-27034895 REVERSE LENGTH=510 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F14O23.25 protein OS=Arabidopsis thaliana GN=F14O23.25 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: drug transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA][ISS]
    transporter activity [ISS]
    drug transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKIQSDDF TSHKNPTLPQ VIEELKELWA MVLPITAMNC LVYVRAVVSV LFLGRLGSLE  60
   61 LAGGALSIGF TNITGYSVMV GLASGLEPVC SQAYGSKNWD LLTLSLHRMV VILLMASLPI 120
  121 SLLWINLGPI MLFMGQNPEI TATAAEYCLY ALPDLLTNTL LQPLRVYLRS QRVTKPMMWC 180
  181 TLAAVAFHVP LNYWLVMVKH WGVPGVAIAS VVTNLIMVVL LVGYVWVSGM LQKRVSGDGD 240
  241 GGSTTMVAVV AQSSSVMELV GGLGPLMRVA VPSCLGICLE WWWYEIVIVM GGYLENPKLA 300
  301 VAATGILIQT TSLMYTVPMA LAGCVSARVG NELGAGRPYK ARLAANVALA CAFVVGALNV 360
  361 AWTVILKERW AGLFTGYEPL KVLVASVMPI VGLCELGNCP QTTGCGILRG TGRPAVGAHV 420
  421 NLGSFYFVGT PVAVGLAFWL KIGFSGLWFG LLSAQAACVV SILYAVLART DWEGEAVKAM 480
  481 RLTSLEMRKV GQDEESSLLL LDDEKLGDVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] Pfam 40.408935 No description for PF01554.9 was found. No confident structure predictions are available.
    2 View Details [247..510] Pfam 35.09691 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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