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Protein Overview: METE2_ARATH

General Information:
Name(s) found: METE2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6006863|gb|AAF00639.1|AC009540_16 putative methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|47600743|emb|CAE55864.1| cobalamin-independent methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|30678935|ref|NP_850507.1| AtMS2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|23297275|gb|AAN12930.1| putative methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|21536794|gb|AAM61126.1| putative methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|186509731|ref|NP_001118564.1| AtMS2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|15228634|ref|NP_187028.1| AtMS2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase [Arabidopsis thaliana] [NCBI NR]
  • 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 OS=Arabidopsis thaliana GN=MS2 PE=1 SV=1 [Swiss-Prot]
  • (Q9SRV5) Putative methionine synthase [athaliana3702.FASTAC.txt]
  • putative methionine synthase [Arabidopsis thaliana]gi|23297275|gb|AAN12930.1| putative methionine synthase [Arabidopsis thaliana]gi|21536794|gb|AAM61126.1| putative methionine synthase [Arabidopsis thaliana]gi|15228634|ref|NP_187028.1| 5-methyltetrahyd [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtMS2 | AtMS2 (Arabidopsis thaliana methionine synthase 2); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase | chr3:957609-960747 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: AtMS2 | AtMS2 (Arabidopsis thaliana methionine synthase 2) | chr3:957609-960747 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative methionine synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cobalamin-independent methionine synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATMS2, MS2 | methionine synthase 2 | chr3:957602-960740 FORWARD LENGTH=765 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Cobalamin-independent methionine synthase OS=Arabidopsis thaliana GN=F20H23.19 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 765 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    apoplast [IDA]
    chloroplast envelope [IDA]
    cytosol [IDA]
    plasma membrane [IDA]
    Biological Process: methionine biosynthetic process [ISS]
    response to salt stress [IEP]
    response to cadmium ion [IEP]
    Molecular Function: methionine synthase activity [IDA]
    5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN  60
   61 TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG NASVPAMEMT KWFDTNYHYI 120
  121 VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL 180
  181 LPKILPVYKE VIAELKAAGA SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV 240
  241 ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA 300
  301 NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE 360
  361 VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK AAAALKGSDH RRTTEVSARL 420
  421 DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED 480
  481 LDIDVLVHGE PERNDMVEYF GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV 540
  541 FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG 600
  601 VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI 660
  661 IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI HSPRIPSTDE IADRINKMLA 720
  721 VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..765] PSI-BLAST 1000.0 A. thaliana cobalamine independent methionine synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
    		•  6.40786073037099 bayes_pls_golite062009
  • 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
    		•  6.40786073037099 bayes_pls_golite062009
  • uroporphyrinogen decarboxylase activity
    		•  3.13638443707338 bayes_pls_golite062009
  • S-methyltransferase activity
    		•  3.0142199413027 bayes_pls_golite062009
  • catalytic activity
    		•  2.37862248560593 bayes_pls_golite062009
  • binding
    		•  1.590130518929 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.54242506764415 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.52150758949987 bayes_pls_golite062009
  • lyase activity
    		•  0.825209465219608 bayes_pls_golite062009
  • protein binding
    		•  0.21865699924356 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle