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View Structure Prediction Details

Protein: METE2_ARATH
Organism: Arabidopsis thaliana
Length: 765 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for METE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|14532772 - gi|14532772|gb|AAK64167.1| putative methionine synthase [Arabidopsis thaliana]
949.0 [0..1] [765..1]

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Predicted Domain #1
Region A:
Residues: [1-765]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN  60
   61 TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG NASVPAMEMT KWFDTNYHYI 120
  121 VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL 180
  181 LPKILPVYKE VIAELKAAGA SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV 240
  241 ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA 300
  301 NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE 360
  361 VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK AAAALKGSDH RRTTEVSARL 420
  421 DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED 480
  481 LDIDVLVHGE PERNDMVEYF GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV 540
  541 FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG 600
  601 VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI 660
  661 IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI HSPRIPSTDE IADRINKMLA 720
  721 VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1u1hA
Description: A. thaliana cobalamine independent methionine synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 6.40786073037099 bayes_pls_golite062009
5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 6.40786073037099 bayes_pls_golite062009
uroporphyrinogen decarboxylase activity 3.13638443707338 bayes_pls_golite062009
S-methyltransferase activity 3.0142199413027 bayes_pls_golite062009
catalytic activity 2.37862248560593 bayes_pls_golite062009
binding 1.590130518929 bayes_pls_golite062009
carbon-carbon lyase activity 1.54242506764415 bayes_pls_golite062009
carboxy-lyase activity 1.52150758949987 bayes_pls_golite062009
lyase activity 0.825209465219608 bayes_pls_golite062009
protein binding 0.21865699924356 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle