YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|20260182, gi|...

General Information:
Name(s) found: gi|23197748 [NCBI NR]
gi|20260182 [NCBI NR]
gi|18421660 [NCBI NR]
gi|15809850 [NCBI NR]
gi|10177438 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|23197748|gb|AAN15401.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20260182|gb|AAM12989.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18421660|ref|NP_568551.1| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15809850|gb|AAL06853.1| AT5g37540/mpa22_p_70 [Arabidopsis thaliana] [NCBI NR]
  • gi|10177438|dbj|BAB10671.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FGI3) Similarity to nucleoid DNA-binding protein (AT5g37540/mpa22_p_70) (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|10177438|dbj|BAB10671.1| unnamed protein product [Arabidopsis thaliana]gi|20260182|gb|AAM12989.1| unknown protein [Arabidopsis thaliana]gi|15809850|gb|AAL06853.1| AT5g37540/mpa22_p_70 [Arabidopsis thaliana]gi|1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aspartyl protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aspartyl protease family protein | chr5:14930092-14931420 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g37540/mpa22_p_70 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pepsin A [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Eukaryotic aspartyl protease family protein | chr5:14912862-14914190 FORWARD LENGTH=442 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g37540/mpa22_p_70 OS=Arabidopsis thaliana GN=At5g37540 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTISKPLFL KLLYIFFFFC YSVSLSWSSS LSLHFPLTSL RLTPTTNSSS FKTSLLSRRN  60
   61 PSPPSSPYTF RSNIKYSMAL ILSLPIGTPS QSQELVLDTG SQLSWIQCHP KKIKKPLPPP 120
  121 TTSFDPSLSS SFSDLPCSHP LCKPRIPDFT LPTSCDSNRL CHYSYFYADG TFAEGNLVKE 180
  181 KFTFSNSQTT PPLILGCAKE STDEKGILGM NLGRLSFISQ AKISKFSYCI PTRSNRPGLA 240
  241 STGSFYLGDN PNSRGFKYVS LLTFPQSQRM PNLDPLAYTV PLQGIRIGQK RLNIPGSVFR 300
  301 PDAGGSGQTM VDSGSEFTHL VDVAYDKVKE EIVRLVGSRL KKGYVYGSTA DMCFDGNHSM 360
  361 EIGRLIGDLV FEFGRGVEIL VEKQSLLVNV GGGIHCVGIG RSSMLGAASN IIGNVHQQNL 420
  421 WVEFDVTNRR VGFSKAECRL LP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..442] PSI-BLAST 66.69897 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle