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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20260182, gi|...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTISKPLFL KLLYIFFFFC YSVSLSWSSS LSLHFPLTSL RLTPTTNSSS FKTSLLSRRN  60
   61 PSPPSSPYTF RSNIKYSMAL ILSLPIGTPS QSQELVLDTG SQLSWIQCHP KKIKKPLPPP 120
  121 TTSFDPSLSS SFSDLPCSHP LCKPRIPDFT LPTSCDSNRL CHYSYFYADG TFAEGNLVKE 180
  181 KFTFSNSQTT PPLILGCAKE STDEKGILGM NLGRLSFISQ AKISKFSYCI PTRSNRPGLA 240
  241 STGSFYLGDN PNSRGFKYVS LLTFPQSQRM PNLDPLAYTV PLQGIRIGQK RLNIPGSVFR 300
  301 PDAGGSGQTM VDSGSEFTHL VDVAYDKVKE EIVRLVGSRL KKGYVYGSTA DMCFDGNHSM 360
  361 EIGRLIGDLV FEFGRGVEIL VEKQSLLVNV GGGIHCVGIG RSSMLGAASN IIGNVHQQNL 420
  421 WVEFDVTNRR VGFSKAECRL LP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle