Protein Overview: 6PGL4_ARATH

General Information:
Name(s) found:	6PGL4_ARATH [Swiss-Prot]
Description(s) found: Found 14 descriptions. SHOW ALL	Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	261 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	carbohydrate metabolic process [IEA] pentose-phosphate shunt [IEA]
Molecular Function:	6-phosphogluconolactonase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVLEKTKS KKIVFPTKKE LSEAMATYTA NLSAKFCKER GYFTVVLSGG DLISWLSELL  60
   61 EPKYQESIEW SKWHIFWVDE RVVPLDHEDS NYKLAFDGFL SKVPIPIANI YPIDKDCAAL 120
  121 GDAKSAALLY EECLKRLVNR NIIRTYKSSG FPQFDLQLLG MGPDGHMASL FPGHYQIKEK 180
  181 ANLVTYITDS PKPPPKRITF TLPVINCASY NLMAVCDEAQ ADAVAKVFNH NFDLPAAWLT 240
  241 ADVEAIWFLD QAAASKIPKG L

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..261]	PSI-BLAST	67.09691	HUMAN GLUCOSAMINE-6-PHOSPHATE DEAMINASE ISOMERASE AT 1.75 A RESOLUTION COMPLEXED WITH N-ACETYL-GLUCOSAMINE-6-PHOSPHATE AND 2-DEOXY-2-AMINO-GLUCITOL-6-PHOSPHATE

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
ribose-5-phosphate isomerase activity	2.78510459473943	bayes_pls_golite062009
nucleic acid binding	2.17718456512191	bayes_pls_golite062009
intramolecular oxidoreductase activity	2.15381323621148	bayes_pls_golite062009
6-phosphogluconolactonase activity	1.97756803122763	bayes_pls_golite062009
transcription regulator activity	1.9283980201455	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses	1.65800801564277	bayes_pls_golite062009
DNA binding	1.55389679363348	bayes_pls_golite062009
binding	1.53908996868286	bayes_pls_golite062009
catalytic activity	1.31732715713197	bayes_pls_golite062009
translation initiation factor activity	1.26125370316069	bayes_pls_golite062009
translation regulator activity	1.21635586954394	bayes_pls_golite062009
translation factor activity, nucleic acid binding	1.09424756417577	bayes_pls_golite062009
transcription factor activity	0.995059566132783	bayes_pls_golite062009
glucosamine-6-phosphate deaminase activity	0.111185777194415	bayes_pls_golite062009
isomerase activity	0.102415560220489	bayes_pls_golite062009
protein binding	0.0293610121675921	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle