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Protein Overview: gi|25406152, gi|...

General Information:
Name(s) found: gi|25406152 [NCBI NR]
gi|224589477 [NCBI NR]
gi|15218385 [NCBI NR]
gi|12323667 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||C96745 hypothetical protein T9N14.3 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|224589477|gb|ACN59272.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15218385|ref|NP_177363.1| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12323667|gb|AAG51800.1|AC067754_16 leucine-rich receptor-like protein kinase, putative; 28019-31149 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 977 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [ISS]
    protein serine/threonine kinase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRPDLLRG SVVATVAATF LLFIFPPNVE STVEKQALFR FKNRLDDSHN ILQSWKPSDS  60
   61 PCVFRGITCD PLSGEVIGIS LGNVNLSGTI SPSISALTKL STLSLPSNFI SGRIPPEIVN 120
  121 CKNLKVLNLT SNRLSGTIPN LSPLKSLEIL DISGNFLNGE FQSWIGNMNQ LVSLGLGNNH 180
  181 YEEGIIPESI GGLKKLTWLF LARSNLTGKI PNSIFDLNAL DTFDIANNAI SDDFPILISR 240
  241 LVNLTKIELF NNSLTGKIPP EIKNLTRLRE FDISSNQLSG VLPEELGVLK ELRVFHCHEN 300
  301 NFTGEFPSGF GDLSHLTSLS IYRNNFSGEF PVNIGRFSPL DTVDISENEF TGPFPRFLCQ 360
  361 NKKLQFLLAL QNEFSGEIPR SYGECKSLLR LRINNNRLSG QVVEGFWSLP LAKMIDLSDN 420
  421 ELTGEVSPQI GLSTELSQLI LQNNRFSGKI PRELGRLTNI ERIYLSNNNL SGEIPMEVGD 480
  481 LKELSSLHLE NNSLTGFIPK ELKNCVKLVD LNLAKNFLTG EIPNSLSQIA SLNSLDFSGN 540
  541 RLTGEIPASL VKLKLSFIDL SGNQLSGRIP PDLLAVGGST AFSRNEKLCV DKENAKTNQN 600
  601 LGLSICSGYQ NVKRNSSLDG TLLFLALAIV VVVLVSGLFA LRYRVVKIRE LDSENRDINK 660
  661 ADAKWKIASF HQMELDVDEI CRLDEDHVIG SGSAGKVYRV DLKKGGGTVA VKWLKRGGGE 720
  721 EGDGTEVSVA EMEILGKIRH RNVLKLYACL VGRGSRYLVF EFMENGNLYQ ALGNNIKGGL 780
  781 PELDWLKRYK IAVGAAKGIA YLHHDCCPPI IHRDIKSSNI LLDGDYESKI ADFGVAKVAD 840
  841 KGYEWSCVAG THGYMAPELA YSFKATEKSD VYSFGVVLLE LVTGLRPMED EFGEGKDIVD 900
  901 YVYSQIQQDP RNLQNVLDKQ VLSTYIEESM IRVLKMGLLC TTKLPNLRPS MREVVRKLDD 960
  961 ADPCVSNSQD TTGKITV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] FFAS03 3.7 Polygalacturonase inhibiting protein PGIP
    2 View Details [143..289] PSI-BLAST 11.522879 Crystal Structure of Internalin C from Listeria monocytogenes
    3 View Details [290..593] FFAS03 6.7 Polygalacturonase inhibiting protein PGIP
    4 View Details [594..662] deduced N/A No confident structure predictions are available.
    5 View Details [663..977] PSI-BLAST 67.045757 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.4085292238246 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.4085292238246 bayes_pls_golite062009
  • receptor activity
    		•  2.2404190515424 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.05390057743708 bayes_pls_golite062009
  • binding
    		•  1.88645638630371 bayes_pls_golite062009
  • protein kinase activity
    		•  1.44543786404772 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.18001333603647 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.14774707593524 bayes_pls_golite062009
  • kinase activity
    		•  1.13356668527648 bayes_pls_golite062009
  • receptor binding
    		•  0.840949032260867 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.813157169054229 bayes_pls_golite062009
  • protein binding
    		•  0.629660151009639 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  0.447613578619564 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.395267677392511 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.176363297428464 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.143284785584541 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • signal transducer activity
    		•  2.4085292238246 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.4085292238246 bayes_pls_golite062009
  • receptor activity
    		•  2.2404190515424 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.05390057743708 bayes_pls_golite062009
  • binding
    		•  1.88645638630371 bayes_pls_golite062009
  • protein kinase activity
    		•  1.44543786404772 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.18001333603647 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.14774707593524 bayes_pls_golite062009
  • kinase activity
    		•  1.13356668527648 bayes_pls_golite062009
  • receptor binding
    		•  0.840949032260867 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.813157169054229 bayes_pls_golite062009
  • protein binding
    		•  0.629660151009639 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  0.447613578619564 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.395267677392511 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.176363297428464 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.143284785584541 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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