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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25406152, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRPDLLRG SVVATVAATF LLFIFPPNVE STVEKQALFR FKNRLDDSHN ILQSWKPSDS  60
   61 PCVFRGITCD PLSGEVIGIS LGNVNLSGTI SPSISALTKL STLSLPSNFI SGRIPPEIVN 120
  121 CKNLKVLNLT SNRLSGTIPN LSPLKSLEIL DISGNFLNGE FQSWIGNMNQ LVSLGLGNNH 180
  181 YEEGIIPESI GGLKKLTWLF LARSNLTGKI PNSIFDLNAL DTFDIANNAI SDDFPILISR 240
  241 LVNLTKIELF NNSLTGKIPP EIKNLTRLRE FDISSNQLSG VLPEELGVLK ELRVFHCHEN 300
  301 NFTGEFPSGF GDLSHLTSLS IYRNNFSGEF PVNIGRFSPL DTVDISENEF TGPFPRFLCQ 360
  361 NKKLQFLLAL QNEFSGEIPR SYGECKSLLR LRINNNRLSG QVVEGFWSLP LAKMIDLSDN 420
  421 ELTGEVSPQI GLSTELSQLI LQNNRFSGKI PRELGRLTNI ERIYLSNNNL SGEIPMEVGD 480
  481 LKELSSLHLE NNSLTGFIPK ELKNCVKLVD LNLAKNFLTG EIPNSLSQIA SLNSLDFSGN 540
  541 RLTGEIPASL VKLKLSFIDL SGNQLSGRIP PDLLAVGGST AFSRNEKLCV DKENAKTNQN 600
  601 LGLSICSGYQ NVKRNSSLDG TLLFLALAIV VVVLVSGLFA LRYRVVKIRE LDSENRDINK 660
  661 ADAKWKIASF HQMELDVDEI CRLDEDHVIG SGSAGKVYRV DLKKGGGTVA VKWLKRGGGE 720
  721 EGDGTEVSVA EMEILGKIRH RNVLKLYACL VGRGSRYLVF EFMENGNLYQ ALGNNIKGGL 780
  781 PELDWLKRYK IAVGAAKGIA YLHHDCCPPI IHRDIKSSNI LLDGDYESKI ADFGVAKVAD 840
  841 KGYEWSCVAG THGYMAPELA YSFKATEKSD VYSFGVVLLE LVTGLRPMED EFGEGKDIVD 900
  901 YVYSQIQQDP RNLQNVLDKQ VLSTYIEESM IRVLKMGLLC TTKLPNLRPS MREVVRKLDD 960
  961 ADPCVSNSQD TTGKITV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle