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Protein Overview: SCP4_ARATH

General Information:
Name(s) found: SCP4_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 441 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNNVYSVL KSLLLLLHLV FLSKQHVDSA SIVKFLPGFE GPLPFELETG YIGVGEEEEV  60
   61 QLFYYFIKSE RNPKEDPLLL WLTGGPGCSA ISGLLYQNGP LAMKLDVYNG TLPSLVSTTY 120
  121 SWTKTSSMIF LDQPVGTGFS YSRTQLFNKP SDTGEAKRIH EFLQKWLGKH QEFSSNPFYV 180
  181 GGDSYSGLVV PATVQEISKG NCQCCNRPIN LQGYVLGNPL TDCVYDCNYR VPFAHKMALI 240
  241 SDELYESLKR TCRGEYVNVH PHDTECLKFV EEFNKLTNRV CERHILHSCC ETETPSCYSY 300
  301 RFMLTTYWAN DETVRKALQI NKESIGEWTR CYRGIPYNHD IKSSVPYHMN NSIDGYRSLI 360
  361 YSGDHDIQVP FLGTQAWIRS LNYSIIDDWR PWMIKDQIAG YTTSYVNKMT FATVTGGGHT 420
  421 AEFTPKETFM MFQRWINGQP L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..441] PSI-BLAST 98.045757 Human 'protective protein', HPP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.3250951453762 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.35106325845064 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.282381128231187 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.22327746138619 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009
  • binding
    		•  0.112743564301567 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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