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Protein Overview: gi|15241616, gi|...

General Information:
Name(s) found: gi|15241616 [NCBI NR]
gi|10177482 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15241616|ref|NP_199304.1| Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177482|dbj|BAB10873.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPPPYQRP PQVFISFYGN ESRDNFIKYL VWGLRDERVN VFVDRAEANR RDIRNISTKI  60
   61 EESNIAVVIF SKRYTESEMC LNELQKMYEH VEQSNLKVIP VFYDVSISGV KNLEDEFGNH 120
  121 FEELREKYAN DPLKILKWED SLSSIVERTG LTSEDHGTGL GLVRAIVTAV KSELMDSERQ 180
  181 NITKGQVFVL ASAAVFICSL IVARLLCTDV KVNKAVKCLL GFPVLAGILH QLYCLRTQPN 240
  241 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 11.522879 Toll-like receptor 1, TLR1
    2 View Details [156..241] MSA 55.296997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.261666574457319 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle