YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15241616, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPPPYQRP PQVFISFYGN ESRDNFIKYL VWGLRDERVN VFVDRAEANR RDIRNISTKI  60
   61 EESNIAVVIF SKRYTESEMC LNELQKMYEH VEQSNLKVIP VFYDVSISGV KNLEDEFGNH 120
  121 FEELREKYAN DPLKILKWED SLSSIVERTG LTSEDHGTGL GLVRAIVTAV KSELMDSERQ 180
  181 NITKGQVFVL ASAAVFICSL IVARLLCTDV KVNKAVKCLL GFPVLAGILH QLYCLRTQPN 240
  241 R

Type	Start	End	Confidence
Non-Cytoplasmic	1	186	0.65
Transmembrane Helix	187	207	0.90
Cytoplasmic	208	214	0.56
Transmembrane Helix	215	234	0.78
Non-Cytoplasmic	235	241	0.53