YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|25406220, gi|...

General Information:
Name(s) found: gi|5903074 [NCBI NR]
gi|25406220 [NCBI NR]
gi|15218617 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|5903074|gb|AAD55632.1|AC008017_5 Similar to part of downy mildew resistance protein RPP5 [Arabidopsis thaliana] [NCBI NR]
  • pir||E96753 hypothetical protein F3N23.5 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218617|ref|NP_177428.1| disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSKFEVF LSFCSEDPSK TFVSVLDRWL EQKDITTNFK DDSFLAEESK LAVVVVSESY  60
   61 PISVLCLNQL EKIVNSHSEG RLSILPIFYG VDPYNVRKQT GYLAEPFQEL GEGYPDDKIQ 120
  121 EWRVSLTKLT NIPALDSRYW SNEADMIELI ANEILSISNR KPLTAKGDGL VGMDRQMQTL 180
  181 YKLLDFKAAE EVRLIGIWGP GGIGKTTLAR YAYEEISSNF KVHVFVDKAE KICHQDRDLL 240
  241 KLLTEKGTTQ GLDVGIDKIK STFGHRKGLI VIDCVDNIKQ LKEIVYLAHW FIPGSRVIFV 300
  301 TQDRNLLVES GVEHAYEVQS LRYDEALQLF SHSAFDQQHP PTSFESLSLR AVHISGFLPL 360
  361 TLKILGSSLR GKDEERWEKE LQQLEGDQEK AIMEITSKRY TRAGKKEEDK EKITSFILLS 420
  421 DD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] FFAS03 3.38 Toll-like receptor 2, TLR2
    2 View Details [189..422] PSI-BLAST 12.0 Structure of the apoptotic protease-activating factor 1 bound to ADP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle