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Protein Overview: LAC12_ARATH

General Information:
Name(s) found: LAC12_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IEA]
    endomembrane system [IEA]
    Biological Process: lignin catabolic process [IEA]
    oxidation reduction [IEA]
    Molecular Function: laccase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTVHTFSIL LFFCSLFSAS LIIAKVQHHD FVIQETPVKR LCKTRNAITV NGMFPGPTLE  60
   61 VNNGDTLEVK VHNRARYNIT IHWHGVRQIR TGWADGPEFV TQCPIRPGKS YTYRFTIQGQ 120
  121 EGTLWWHAHS SWLRATVYGA LIIHPTPGSS FPFPKPDRQT ALMLGEWWNA NPVDVINQAT 180
  181 RTGAAPNISD AYTINGQPGD LYNCSTKETV VVPINSGETS LLRVINAALN QPLFFTVANH 240
  241 KLTVVGADAS YLKPFTTKVL MLGPGQTTDV LLTADQPPKR YYIAARAYQS AQNAPFDNTT 300
  301 TTAILQYKKT TTTSKPIMPV LPAFNDTNTV TSFSRKFKSL RNVVVPKTID DNLFFTIGLG 360
  361 LDNCPKKFPK SRCQGLNGTR FTASMNNVSF VLPSNFSLLQ AHSNGIPGVF TTDFPSKPPV 420
  421 KFDYTGNNIS RALFQPVKGT KLYKLKYGSR VQVVLQDTNI VTSENHPIHL HGYDFYIVGE 480
  481 GFGNFNPKKD TSKFNLVDPP LRNTVAVPVN GWAVIRFVAD NPGVWLMHCH LDVHIKWGLA 540
  541 MAFLVDNGVG ELETLEAPPH DLPIC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..565] PSI-BLAST 103.0 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, oxidizing metal ions
    		•  6.65192723037124 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  6.31879033933655 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  5.08231506697861 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.97613096658411 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.59563513647911 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.5497559272853 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.81325448081642 bayes_pls_golite062009
  • copper ion binding
    		•  3.27145156911424 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  3.07382952844477 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.9428517783106 bayes_pls_golite062009
  • transporter activity
    		•  2.75690053147562 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  2.70015092777938 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.68353223516483 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.67027550825653 bayes_pls_golite062009
  • ferroxidase activity
    		•  2.11615717093435 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  2.11615717093435 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.88441243755534 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.17954317549442 bayes_pls_golite062009
  • binding
    		•  1.14851914699653 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.379596275876029 bayes_pls_golite062009
  • catalytic activity
    		•  0.363071622766357 bayes_pls_golite062009
  • cation binding
    		•  0.305777337672225 bayes_pls_golite062009
  • metal ion binding
    		•  0.305777337672225 bayes_pls_golite062009
  • ion binding
    		•  0.300057966011705 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.269767937058687 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.262778393547427 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.246123492452788 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.222255654263847 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.222255654263847 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.222255654263847 bayes_pls_golite062009
  • protein binding
    		•  0.19183671060378 bayes_pls_golite062009
  • receptor binding
    		•  0.0601969032951899 bayes_pls_golite062009
  • signal transducer activity
    		•  0.049534674746601 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.049534674746601 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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