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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTVHTFSIL LFFCSLFSAS LIIAKVQHHD FVIQETPVKR LCKTRNAITV NGMFPGPTLE  60
   61 VNNGDTLEVK VHNRARYNIT IHWHGVRQIR TGWADGPEFV TQCPIRPGKS YTYRFTIQGQ 120
  121 EGTLWWHAHS SWLRATVYGA LIIHPTPGSS FPFPKPDRQT ALMLGEWWNA NPVDVINQAT 180
  181 RTGAAPNISD AYTINGQPGD LYNCSTKETV VVPINSGETS LLRVINAALN QPLFFTVANH 240
  241 KLTVVGADAS YLKPFTTKVL MLGPGQTTDV LLTADQPPKR YYIAARAYQS AQNAPFDNTT 300
  301 TTAILQYKKT TTTSKPIMPV LPAFNDTNTV TSFSRKFKSL RNVVVPKTID DNLFFTIGLG 360
  361 LDNCPKKFPK SRCQGLNGTR FTASMNNVSF VLPSNFSLLQ AHSNGIPGVF TTDFPSKPPV 420
  421 KFDYTGNNIS RALFQPVKGT KLYKLKYGSR VQVVLQDTNI VTSENHPIHL HGYDFYIVGE 480
  481 GFGNFNPKKD TSKFNLVDPP LRNTVAVPVN GWAVIRFVAD NPGVWLMHCH LDVHIKWGLA 540
  541 MAFLVDNGVG ELETLEAPPH DLPIC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle