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Protein Overview: SCP39_ARATH

General Information:
Name(s) found: SCP39_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELQDWSVT TCLLLLLFQA SQIHCTSQTH VLNRLLYRSK RGFGSSVDTN HLNAIRHLSV  60
   61 SSPQNTSGVN QQEQKERDLI ENLPGQPSVS FRQYGGYVTV NESAGRSLYY YFVEATKTKK 120
  121 SLPLVLWLNG GPGCSSLYGA FQELGPFRIY GDGKTLYTNP YSWNNVANIL FLESPVGTGF 180
  181 SYTNTESDLE NPGDMKAAAD KYIFLVKWLE RFPEYKGREF YIAGESYAGH YVPQLAQTIL 240
  241 VHNKNQNFIN LRGILIGNPT LNDIVETTGS FDYLVSHALL SQDSLLSYKE NCATDTPKME 300
  301 VDCIALSMKI DDDIKKMNLY NILTPTCINA TLTPLTNQSK ECTTVLQYEP CGMQYIAAYL 360
  361 NREDVQRSMH VTKLPHTWML CNEATGFNWN QTDYSASMLP ILKELMKHDQ LRVWVYTGDT 420
  421 DTVIPLTVTM HALKMMNLTA VTDWLPWFSE GQVGGFTEEY KGNFRYATVI GAGHEVPLYK 480
  481 PKAALTLFKH FIRNSPLPLT P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..501] PSI-BLAST 99.0 Human 'protective protein', HPP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.3250951453762 bayes_pls_golite062009
  • binding
    		•  0.780364496307855 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.541803897301601 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43631945855397 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle