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Protein Overview: gi|194306666, gi...

General Information:
Name(s) found: gi|7270668 [NCBI NR]
gi|71143064 [NCBI NR]
gi|4006861 [NCBI NR]
gi|25407796 [NCBI NR]
gi|194306666 [NCBI NR]
gi|15235474 [NCBI NR]
Description(s) found:
Found 17 descriptions.
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  • gi|7270668|emb|CAB80385.1| tubulin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|71143064|gb|AAZ23923.1| At4g37190 [Arabidopsis thaliana] [NCBI NR]
  • gi|4006861|emb|CAB16779.1| tubulin-like protein [Arabidopsis thaliana] [NCBI NR]
  • pir||D85439 tubulin-like protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|194306666|gb|ACF41946.1| At4g37190 [Arabidopsis thaliana] [NCBI NR]
  • gi|15235474|ref|NP_195436.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 562 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    plasma membrane [IDA]
    Biological Process: protein polymerization [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIVTIQVG EFANFVGSHF WNFQDELLGL ASDPESDPIF RNHNLDMDVL YRSGETQQGV  60
   61 ATYTPRLVSV NLKGALGTMS SRGTLYNEGS SSRSDSSATW FGDVDTQRSE PRKRNLFLQS 120
  121 LYEEEHVVGK EKAKEIEDKD IVGCLDEEVE CWTDFSKSHY HPQSLYELNG LWMDSQAFNN 180
  181 YGIGKDVFSE ASRGEEICDR LRFFVEECDH IQGIKFLVDD SGGFSAVAAD FLENMADEYT 240
  241 NVPVLLYSVR TPMSQMSSKK TVSNKLHDAI SFSRLSSFCK LFTPIGLPSL TGSKASKFLN 300
  301 LGDEKPYRSS AVYAAALHSS TIPFRMQPTS SDSSEVSNSM DVNTLVQLLT GRGRQNIVAI 360
  361 LDSAMPAPTL AGKQLENTLL TSLQALTPEV TEDVEDNQAV ESMCILGALR SEDKEALVSE 420
  421 VKNAVDASYE QATTKGKPLF CNLSVSRCPL PVPLPFPSIF GNLVGRKGEI LSSPVSDSLY 480
  481 RGSLDVHSIP VATRWRSSSA ILPFLETRMG NLEKLGIQWG AMGSDVVRAW GFGREELQEM 540
  541 RENLSKMVSE LNPQFFESSD SD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] FFAS03 3.47 Structure of BtubA from Prosthecobacter dejongeii
    2 View Details [72..562] PSI-BLAST 145.0 Tubulin-colchicine-vinblastine: stathmin-like domain complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of cytoskeleton
    		•  4.20569829104815 bayes_pls_golite062009
  • structural molecule activity
    		•  1.49062700084371 bayes_pls_golite062009
  • GTPase activity
    		•  1.47429346598123 bayes_pls_golite062009
  • binding
    		•  1.37861013116188 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.34163967063748 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.30976970862305 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.23995409691722 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.2207183653046 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.21864338056199 bayes_pls_golite062009
  • protein binding
    		•  0.764892815699872 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0508375661543299 bayes_pls_golite062009
  • tubulin binding
    		•  0.0306519764509874 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle