| Protein: | gi|194306666, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 562 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|194306666, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
513.0 | [0..87] | [562..8] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MREIVTIQVG EFANFVGSHF WNFQDELLGL ASDPESDPIF RNHNLDMDVL YRSGETQQGV 60
61 ATYTPRLVSV N
|
| Detection Method: |  |
| Confidence: | 3.47 |
| Match: | 2btoA |
| Description: | Structure of BtubA from Prosthecobacter dejongeii |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [72-562] |
1 11 21 31 41 51
| | | | | |
1 LKGALGTMSS RGTLYNEGSS SRSDSSATWF GDVDTQRSEP RKRNLFLQSL YEEEHVVGKE 60
61 KAKEIEDKDI VGCLDEEVEC WTDFSKSHYH PQSLYELNGL WMDSQAFNNY GIGKDVFSEA 120
121 SRGEEICDRL RFFVEECDHI QGIKFLVDDS GGFSAVAADF LENMADEYTN VPVLLYSVRT 180
181 PMSQMSSKKT VSNKLHDAIS FSRLSSFCKL FTPIGLPSLT GSKASKFLNL GDEKPYRSSA 240
241 VYAAALHSST IPFRMQPTSS DSSEVSNSMD VNTLVQLLTG RGRQNIVAIL DSAMPAPTLA 300
301 GKQLENTLLT SLQALTPEVT EDVEDNQAVE SMCILGALRS EDKEALVSEV KNAVDASYEQ 360
361 ATTKGKPLFC NLSVSRCPLP VPLPFPSIFG NLVGRKGEIL SSPVSDSLYR GSLDVHSIPV 420
421 ATRWRSSSAI LPFLETRMGN LEKLGIQWGA MGSDVVRAWG FGREELQEMR ENLSKMVSEL 480
481 NPQFFESSDS D
|
| Detection Method: | |
| Confidence: | 145.0 |
| Match: | 1z2bA |
| Description: | Tubulin-colchicine-vinblastine: stathmin-like domain complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of cytoskeleton | 4.20569829104815 | bayes_pls_golite062009 |
| structural molecule activity | 1.49062700084371 | bayes_pls_golite062009 |
| GTPase activity | 1.47429346598123 | bayes_pls_golite062009 |
| binding | 1.37861013116188 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.34163967063748 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.30976970862305 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.23995409691722 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.2207183653046 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.21864338056199 | bayes_pls_golite062009 |
| protein binding | 0.764892815699872 | bayes_pls_golite062009 |
| hydrolase activity | 0.0508375661543299 | bayes_pls_golite062009 |
| tubulin binding | 0.0306519764509874 | bayes_pls_golite062009 |
