YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: 4CLL6_ARATH

General Information:
Name(s) found: 4CLL6_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • pir||T05038 4-coumarate-CoA ligase homolog F13C5.180 - Arabidopsis thaliana (fragment) [NCBI NR]
  • gi|7268695|emb|CAB78903.1| 4-coumarate-CoA ligase-like [Arabidopsis thaliana] [NCBI NR]
  • gi|36312875|gb|AAQ86592.1| 4-coumarate CoA ligase isoform 7 [Arabidopsis thaliana] [NCBI NR]
  • gi|2832629|emb|CAA16758.1| 4-coumarate-CoA ligase-like [Arabidopsis thaliana] [NCBI NR]
  • pir||F85214 4-coumarate-CoA ligase-like [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|158564048|sp|Q84P24.2|4CLL6_ARATH RecName: Full=4-coumarate--CoA ligase-like 6; AltName: Full=4-coumarate--CoA ligase isoform 7; Short=At4CL7 [NCBI NR]
  • gi|15234087|ref|NP_193636.1| 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein [Arabidopsis thaliana] [NCBI NR]
  • 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2 [Swiss-Prot]
  • (O49414) 4-coumarate-CoA ligase - like (4-coumarate-CoA ligase-like) [athaliana3702.FASTAC.txt]
  • 4-coumarate CoA ligase isoform 7 [Arabidopsis thaliana]gi|7268695|emb|CAB78903.1| 4-coumarate-CoA ligase-like [Arabidopsis thaliana]gi|2832629|emb|CAA16758.1| 4-coumarate-CoA ligase-like [Arabidopsis thaliana]gi|15234087|ref|NP_193636.1| 4-coumarate--C [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 4-coumarate--CoA ligase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | chr4:10411726-10414232 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 4-coumarate-CoA ligase-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 4-coumarate CoA ligase isoform 7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 4-coumarate-CoA ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | AMP-dependent synthetase and ligase family protein | chr4:10411715-10414221 REVERSE LENGTH=566 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: 4-coumarate-CoA ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG  60
   61 DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV VSLVLPNSVY FPMIFLSLIS 120
  121 LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI 180
  181 ENPKFYSIMK ESFGFVPKPL IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE 240
  241 ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT 300
  301 HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM 360
  361 TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS FLPPGNRGEL WIQGPGVMKG 420
  421 YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS 480
  481 HPLIIDAAVT AAPNEECGEI PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS 540
  541 IPKSPTGKIL RKELKRILTN SVSSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..566] PSI-BLAST 108.0 FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  4.4819902512335 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  4.48129067128523 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  2.89129353633634 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • CoA-ligase activity
    		•  2.5960476232329 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31193176808353 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.2638869228049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle