Protein Overview: Y1668_ARATH

General Information:
Name(s) found:	Y1668_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|224589463\|gb\|ACN59265.1\| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] [NCBI NR] gi\|15219755\|ref\|NP_176855.1\| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] [NCBI NR] gi\|12597769\|gb\|AAG60082.1\|AC013288_16 receptor protein kinase, putative [Arabidopsis thaliana] [NCBI NR] Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=2 SV=1 [Swiss-Prot] (Q9C9N5) Receptor protein kinase, putative [athaliana3702.FASTAC.txt] receptor protein kinase, putative [Arabidopsis thaliana]gi\|15219755\|ref\|NP_176855.1\| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Leucine-rich repeat transmembrane protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| leucine-rich repeat transmembrane protein kinase, putative \| chr1:24934363-24936497 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta] receptor protein kinase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| Leucine-rich repeat protein kinase family protein \| chr1:24930700-24932834 REVERSE LENGTH=685 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=1 SV=1 [ARATH-contam.fasta]
Organism:	Arabidopsis thaliana
Length:	685 amino acids
Gene Ontology:
Cellular Component:	plasma membrane [IDA]
Biological Process:	transmembrane receptor protein tyrosine kinase signaling pathway [ISS] protein amino acid phosphorylation [IEA][ISS]
Molecular Function:	ATP binding [ISS] protein serine/threonine kinase activity [ISS] kinase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLFLILCF ILTHFFAIAT SLNDQGLALL SFKQSIQNQS DSVFTNWNSS DSNPCSWQGV  60
   61 TCNYDMRVVS IRLPNKRLSG SLDPSIGSLL SLRHINLRDN DFQGKLPVEL FGLKGLQSLV 120
  121 LSGNSFSGFV PEEIGSLKSL MTLDLSENSF NGSISLSLIP CKKLKTLVLS KNSFSGDLPT 180
  181 GLGSNLVHLR TLNLSFNRLT GTIPEDVGSL ENLKGTLDLS HNFFSGMIPT SLGNLPELLY 240
  241 VDLSYNNLSG PIPKFNVLLN AGPNAFQGNP FLCGLPIKIS CSTRNTQVVP SQLYTRRANH 300
  301 HSRLCIILTA TGGTVAGIIF LASLFIYYLR KASARANKDQ NNRTCHINEK LKKTTKPEFL 360
  361 CFKTGNSESE TLDENKNQQV FMPMDPEIEF DLDQLLKASA FLLGKSRIGL VYKVVLENGL 420
  421 MLAVRRLEDK GWLRLKEFLA DVEAMAKIKH PNVLNLKACC WSPEEKLLIY DYIPNGDLGS 480
  481 AIQGRPGSVS CKQLTWTVRL KILRGIAKGL TYIHEFSPKR YVHGHINTSN ILLGPNLEPK 540
  541 VSGFGLGRIV DTSSDIRSDQ ISPMETSSPI LSRESYYQAP EAASKMTKPS QKWDVYSFGL 600
  601 VILEMVTGKS PVSSEMDLVM WVESASERNK PAWYVLDPVL ARDRDLEDSM VQVIKIGLAC 660
  661 VQKNPDKRPH MRSVLESFEK LVTSI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
receptor activity	3.26307298864411	bayes_pls_golite062009
transmembrane receptor activity	3.15814977487775	bayes_pls_golite062009
molecular transducer activity	2.54176035045352	bayes_pls_golite062009
signal transducer activity	2.54176035045352	bayes_pls_golite062009
G-protein coupled receptor activity	2.38174370875276	bayes_pls_golite062009
protein kinase activity	1.61450095469422	bayes_pls_golite062009
transmembrane receptor protein kinase activity	1.50579173120225	bayes_pls_golite062009
binding	1.44369481405695	bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity	1.36671598599873	bayes_pls_golite062009
kinase activity	1.28067810202729	bayes_pls_golite062009
actin binding	1.21726363067325	bayes_pls_golite062009
cytoskeletal protein binding	1.17332908979699	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	1.05564877695171	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.950165801339728	bayes_pls_golite062009
protein binding	0.646159692466759	bayes_pls_golite062009
structural molecule activity	0.611417906910562	bayes_pls_golite062009
receptor binding	0.596307412859703	bayes_pls_golite062009
transferase activity	0.435331931559158	bayes_pls_golite062009
epidermal growth factor receptor binding	0.430075899423884	bayes_pls_golite062009
protein-hormone receptor activity	0.42902267001067	bayes_pls_golite062009
protein tyrosine kinase activity	0.231213253402712	bayes_pls_golite062009
actin filament binding	0.142821832073786	bayes_pls_golite062009
growth factor binding	0.0358215683345522	bayes_pls_golite062009

No functions predicted.

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..280]	PSI-BLAST	11.30103	Polygalacturonase inhibiting protein PGIP
2	View Details	[281..371]	deduced	N/A	No confident structure predictions are available.
3	View Details	[372..685]	PSI-BLAST	60.154902	No description for 2qkwB was found.

Protein Overview: Y1668_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: