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Protein Overview: gi|25406223, gi|...

General Information:
Name(s) found: gi|5903076 [NCBI NR]
gi|25406223 [NCBI NR]
gi|15218619 [NCBI NR]
Description(s) found:
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  • gi|5903076|gb|AAD55634.1|AC008017_7 Similar to disease resistance protein NL25 [Arabidopsis thaliana] [NCBI NR]
  • pir||G96753 Similar to disease resistance protein NL25 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218619|ref|NP_177430.1| disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9SSN9) Similar to disease resistance protein NL25 [athaliana3702.FASTAC.txt]
  • Similar to disease resistance protein NL25 [Arabidopsis thaliana]gi|25406223|pir||G96753 Similar to disease resistance protein NL25 [imported] - Arabidopsis thalianagi|15218619|ref|NP_177430.1| disease resistance protein (TIR-NBS class), putative [Arabi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein (TIR-NBS class) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | disease resistance protein (TIR-NBS class), putative | chr1:27424747-27426660 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to disease resistance protein NL25 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Disease resistance protein (TIR-NBS class) | chr1:27421086-27422999 FORWARD LENGTH=512 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Similar to disease resistance protein NL25 OS=Arabidopsis thaliana GN=F3N23.7 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSSEH KVFLSFRRED TGRTFVSHLY RSLDQKEIRT YKFENQQAGD GKRISSEVKQ  60
   61 AINESRIAVV VISENYVSSV LCLDVLAKII ERLPLIKIET VFYEVDPGDL TRPTGKFADD 120
  121 FRRHEARENR RTVNRWRDAL DQLVSITNSN FCSRNWEDDS KMIDDLIIRL INIYFSKYYT 180
  181 PDVDIIAETT VGLDASVLGL MTDIDMKYKL NSLSGSVESG FGLERYALEA TSVMDDMSNE 240
  241 SPSPTSDDSN GLVGMYRHKK AVYGLLDLES KNQVRTIGIW GFQGVGKTTL AECVFDDISS 300
  301 HFQHYCFLTN ANKIYQNRIS PSLLKHLTRR RSSEDIFDAI KPSLVNRKVL FVVDGVDATY 360
  361 NEQFNDAMKV TRWLGPGSRI IMTSRFKSSL KFGGAKYEME CLRYEEALQL FSLYAFKKTY 420
  421 PLIGFELFSI RAVHFAGRLP LSLKVLGSFL YDKDEESWKR TLHKLEASQD NDRRYVSNYI 480
  481 GAGEYLPRRQ IELEQYVSPD EEEYSPSYIM SL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] FFAS03 3.71 No description for 2j67A was found.
    2 View Details [176..236] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [237..512] PSI-BLAST 14.0 Structure of the apoptotic protease-activating factor 1 bound to ADP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle