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Protein Overview: SCP40_ARATH

General Information:
Name(s) found: SCP40_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 502 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGQGYSYS VIASVLVLLC VVVSRIECSS QVHALSRLYL SKRGVGGSST MDTSHFKAVK  60
   61 DLKPSSLRSA ANQEGLRKRD LIRRLPGQPP VSFDQYGGYV TVNESAGRSF FYYFVEASKS 120
  121 KDSSPLLLWL NGGPGCSSLA YGALQELGPF RVHSDGKTLF RNRYAWNNAA NVLFLESPAG 180
  181 VGFSYTNTTS DLEKHGDRNT AADNYIFLVN WLERFPEYKG RDLYIAGESY AGHYVPQLAH 240
  241 TILLHHRSFF NLKGILIGNA VINDETDLMG MYDFFESHAL ISEDSLARLK SNCDLKTESA 300
  301 SVMTEECAVV SDQIDMDTYY LDIYNIYAPL CLNSTLTRRP KRGTTIREFD PCSDHYVQAY 360
  361 LNRPEVQAAL HANATKLPYE WQPCSSVIKK WNDSPTTVIP LIKELMGQGV RVWVFSGDTD 420
  421 GRIPVTSTKY SLKKMNLTAK TAWHPWYLGG EVGGYTEEYK GKLTFATVRG AGHQVPSFQP 480
  481 KRSLSLFIHF LNDTPLPDTS RY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..502] PSI-BLAST 100.0 Human 'protective protein', HPP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.3250951453762 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.541803897301601 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.35106325845064 bayes_pls_golite062009
  • binding
    		•  0.351031277062254 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle