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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP40_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGQGYSYS VIASVLVLLC VVVSRIECSS QVHALSRLYL SKRGVGGSST MDTSHFKAVK  60
   61 DLKPSSLRSA ANQEGLRKRD LIRRLPGQPP VSFDQYGGYV TVNESAGRSF FYYFVEASKS 120
  121 KDSSPLLLWL NGGPGCSSLA YGALQELGPF RVHSDGKTLF RNRYAWNNAA NVLFLESPAG 180
  181 VGFSYTNTTS DLEKHGDRNT AADNYIFLVN WLERFPEYKG RDLYIAGESY AGHYVPQLAH 240
  241 TILLHHRSFF NLKGILIGNA VINDETDLMG MYDFFESHAL ISEDSLARLK SNCDLKTESA 300
  301 SVMTEECAVV SDQIDMDTYY LDIYNIYAPL CLNSTLTRRP KRGTTIREFD PCSDHYVQAY 360
  361 LNRPEVQAAL HANATKLPYE WQPCSSVIKK WNDSPTTVIP LIKELMGQGV RVWVFSGDTD 420
  421 GRIPVTSTKY SLKKMNLTAK TAWHPWYLGG EVGGYTEEYK GKLTFATVRG AGHQVPSFQP 480
  481 KRSLSLFIHF LNDTPLPDTS RY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle