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Protein Overview: DEGP4_ARATH

General Information:
Name(s) found: DEGP4_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Protease Do-like 4, mitochondrial OS=Arabidopsis thaliana GN=DEGP4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 518 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: protein binding [IEA]
    catalytic activity [IEA]
    serine-type peptidase activity [ISS]
    serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFRFLQTLA RFCRFLLISV LGFRFSPLLL LGYVKLQDEN KHNSESALAS GTDAKQPEAA  60
   61 ENVTSSSIDF AVNSVVKVFT VYSMPSVLQP WRNWPQQESG GSGFVISGKK ILTNAHVVAD 120
  121 HIFLQVRKHG SPTKYKAQVR AIGHECDLAI LEIDNEEFWE DMIPLELGEI PSLDESVAVF 180
  181 GYPTGGDSVS ITKGYVSRVE YTRYAHGGTT LLAIQTDAAI NPGNSGGPAI IGNKMAGVAF 240
  241 QKDPSADNIG YIIPTPVIKH FLTAVEENGQ YGGFCTLDIS YQLMENSQLR NHFKMGPEMT 300
  301 GILINEINPL SDAYKRLRKD DIILAIDDVL IGNDAKVTFR NKERINFNHF VSMKKLDETV 360
  361 LLQVLRDGKE HEFHIMVKPV PPLVPGHQYD KLPSYYIFAG FVFVPLTQPY IDSTLICNCA 420
  421 IKYMPEKAGE QLVLADDINA GYTDFKNLKV IKVNGVQVEN LKHLTELVET CWTEDLRLDL 480
  481 ENEKVVVLNY ANAKEATSLI LELHRIPSAN EYDYQWQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..518] PSI-BLAST 69.221849 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.879220468838319 bayes_pls_golite062009
  • hydrolase activity
    		•  0.83105139693348 bayes_pls_golite062009
  • peptidase activity
    		•  0.81546887337164 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.5672666868164 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.50826037975448 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.508252655710209 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.264500844139819 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  0.201782736081951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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