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Protein Overview: gi|5923663, gi|6...

General Information:
Name(s) found: gi|92856564 [NCBI NR]
gi|6403502 [NCBI NR]
gi|5923663 [NCBI NR]
gi|15231994 [NCBI NR]
Description(s) found:
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  • gi|92856564|gb|ABE77399.1| At3g08980 [Arabidopsis thaliana] [NCBI NR]
  • gi|6403502|gb|AAF07842.1|AC010871_18 putative mitochondrial inner membrane protease subunit 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|5923663|gb|AAD56314.1|AC009326_1 putative signal peptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|15231994|ref|NP_187510.1| signal peptidase I family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9S724) Putative mitochondrial inner membrane protease subunit 2 [athaliana3702.FASTAC.txt]
  • putative mitochondrial inner membrane protease subunit 2 [Arabidopsis thaliana]gi|5923663|gb|AAD56314.1| putative signal peptidase [Arabidopsis thaliana]gi|15231994|ref|NP_187510.1| signal peptidase I family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Signal peptidase I family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | signal peptidase I family protein | chr3:2741284-2742380 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At3g08980 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative mitochondrial inner membrane protease subunit 2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative signal peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • peptidase/ serine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr3:2741279-2742375 FORWARD LENGTH=154 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At3g08980 OS=Arabidopsis thaliana GN=T16O11.6 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 154 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type peptidase activity [IEA]
    peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIQNILWQV AKKSFTGSII GLTISDRCCS VVPVRGDSMS PTFNPQRNSY LDDYVLVDKF  60
   61 CLKDYKFARG DVVVFSSPTH FGDRYIKRIV GMPGEWISSS RDVIRVPEGH CWVEGDNKTS 120
  121 SLDSRSFGPI PLGLIQGRVT RVMWPPQRIS KIGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 21.30103 Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor
    2 View Details [93..154] FFAS03 3.58 Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle