YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PUB52_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..109] PSI-BLAST 6.045757 No description for 2gm3A was found.
2 View Details [110..460] PSI-BLAST 3.522879 Polygalacturonase inhibiting protein PGIP
3 View Details [461..769] PSI-BLAST 68.09691 No description for 2nruA was found.
4 View Details [770..845] PSI-BLAST 4.045757 No description for 2f42A was found.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • signal transducer activity
  • 2.54176035045352 bayes_pls_golite062009
  • molecular transducer activity
  • 2.54176035045352 bayes_pls_golite062009
  • receptor activity
  • 2.44108148686445 bayes_pls_golite062009
  • transmembrane receptor activity
  • 2.25077658159974 bayes_pls_golite062009
  • binding
  • 1.87302803330255 bayes_pls_golite062009
  • protein kinase activity
  • 1.43632437878638 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.12585418084562 bayes_pls_golite062009
  • kinase activity
  • 1.11577341189523 bayes_pls_golite062009
  • G-protein coupled receptor activity
  • 1.04507575991279 bayes_pls_golite062009
  • protein binding
  • 0.646159692466759 bayes_pls_golite062009
  • transferase activity
  • 0.435331931559158 bayes_pls_golite062009
  • nucleic acid binding
  • 0.370391722473665 bayes_pls_golite062009
  • protein tyrosine kinase activity
  • 0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
  • 0.154501444195573 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle