| Protein: | PUB52_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 845 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB52_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..11] | [844..5] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MEEKKVVRAL SEHLSLPPPP SPSVAVAING KKKSKYVVFW ALEKFIPEGF TDFKLLYVRP 60
61 PVSYIPTPMG IAVAVSELRE DVVSAYKQEL DWSANEMLRP YKKMFERRK
|
| Detection Method: |  |
| Confidence: | 6.045757 |
| Match: | 2gm3A |
| Description: | No description for 2gm3A was found. |
|
Region A: Residues: [110-460] |
1 11 21 31 41 51
| | | | | |
1 VQVEVLLLDS LEPAAAIAEE IAGTGVTKLV IGMSLRGFFS RKIDMSSLIA TAVPRFCTVY 60
61 VISKGKLASV RPSESDASGS IRFERSSSTS GSTDSPRLPP EYQDFLSAVS EAQSRVSPFS 120
121 PALKHSMGSN AVAQMDTSSS GTDQEEVSTG RGMEIVHSGI EGKKNKDESF SASFPMGTEA 180
181 YNSMSWTSKW RDHEDRREMR SSSSSNNHDL VNMDWGAVVP ENYSWVSHTA SHMSDGLLSV 240
241 HSITDNQVNL NFEIEKLRAE LKHVQEMYAM AQTETVGASK KLTELNQRRF EESEKLVELK 300
301 EKEEVAKDTA SKEKQRYEEA MKEAEKVKEL MMKEALHRRE AEFKAERDAR E
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| receptor activity | 2.44108148686445 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25077658159974 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.04507575991279 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| nucleic acid binding | 0.370391722473665 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
|
Region A: Residues: [461-769] |
1 11 21 31 41 51
| | | | | |
1 KDKLQASLVS PGVQYQHYTW EEIAAATSDF AENLKIGIGA YGSVYKCNLH HTTGAVKVLH 60
61 AGETQLSKQF DQELEILSKI RHPHLVLLLG ACPERGCLVY EYMDNGSLDD RLMLVNDTPP 120
121 IPWFERFRIA LEVASALVFL HKSKPRPIIH RDLKPGNILL DHNFVSKLGD VGLSTMVNQD 180
181 DVSSRTIFKQ TSPVGTLCYI DPEYQRTGII SPKSDVYSLG VVILQLITAK PAIAITHMVE 240
241 EAIGDDAEFM AILDKKAGSW PISDTRELAA LGLCCTEMRR RDRPDLKDQI IPALERLRKV 300
301 ADKAQNLLS
|
| Detection Method: | |
| Confidence: | 68.09691 |
| Match: | 2nruA |
| Description: | No description for 2nruA was found. |
|
Region A: Residues: [770-845] |
1 11 21 31 41 51
| | | | | |
1 RTPSGPPSHF ICPLLKGVMN EPCVAADGYT YDREAIEEWL RQKDTSPVTN LPLPNKNLIA 60
61 NYTLYSAIME WKSNKR
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 2f42A |
| Description: | No description for 2f42A was found. |
