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Protein Overview: gi|15239702, gi|...

General Information:
Name(s) found: gi|9758877 [NCBI NR]
gi|15239702 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9758877|dbj|BAB09431.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15239702|ref|NP_199689.1| disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 669 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSSSSSQ KFYVFLSFQG LDTRRTFVSH LRRSLDRKGI KTFEDENESL RGELDSSAVY  60
   61 QTIGESKVAV VLISVNYASS PLCLDSLLKI LKFHQSGSLV LIPIFYEVDP MDVRKQIGKL 120
  121 YEAFSLHERE NPEKVQTWRQ ALSQLVSIPG GQYSEIWDGD AELIHQITVD IWNIFVASKS 180
  181 SDLCGLVGMD RHMKAMYRLL DLGLKDEVRH IKIWGSRDIG KTEFAKYLYE EILHNFDTHV 240
  241 MLKAPQRISR FEEVRLAEYV CLRLEKARTL SKTSKDTASR FLLVLDNVNE SFDPIRKLAR 300
  301 VISSFGPGSR IITTTRNLQF SSTSPLPFQY EVLGLEFSEA LQLFCLHAFE QTHPFLGFED 360
  361 LSCRAVKLAG GFPLSLKRLG SRFSGRKKDE WEVILFGYER STVNGVINPE KNSLDGLYEY 420
  421 SSIMETFSSQ PISSTTRSFE DLVGMNHRMQ ALSALLELES DKEVRVVGIW GTGGIGKTTL 480
  481 SRYAYERISQ QFHTHAFLEN AQESSSSCLE ERFLSKAIQR EALAVRNSKD CPEIMKSLIQ 540
  541 HRKVLLIVDD VDNVKTLEEV FKITSWLVPG SRVIVTARDE SFLLASGVKY IFEVKGLRFD 600
  601 QALQLFYQFA FKQKSPPVRF RQLSVRAIKL VGFLPLALKV TGSMLYRKKE SYWETILQCF 660
  661 EEKQNKGTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] PSI-BLAST 5.154902 Crystal Structure Analysis of ClpB
    2 View Details [160..522] PSI-BLAST 14.154902 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [523..669] FFAS03 3.83 Structure of the apoptotic protease-activating factor 1 bound to ADP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle