Protein Overview: YKT61_ARATH

General Information:
Name(s) found:	YKT61_ARATH [Swiss-Prot]
Description(s) found: Found 18 descriptions. SHOW ALL	VAMP-like protein YKT61 OS=Arabidopsis thaliana GN=YKT61 PE=2 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	199 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	vesicle-mediated transport [IEA] transport [IEA]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITALLVLK CAPEASDPVI LSNASDVSHF GYFQRSSVKE FVVFVGRTVA SRTPPSQRQS  60
   61 VQHEEYKVHA YNRNGLCAVG FMDDHYPVRS AFSLLNQVLD EYQKSFGESW RSAKEDSNQP 120
  121 WPYLTEALNK FQDPAEADKL LKIQRELDET KIILHKTIDS VLARGEKLDS LVEKSSDLSM 180
  181 ASQMFYKQAK KTNSCCTIL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..132]	PSI-BLAST	31.0	Synaptobrevin homolog 1 ykt6
2	View Details	[133..199]	PSI-BLAST	14.69897	Synaptobrevin

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
protein-cysteine S-acyltransferase activity	5.70902768432932	bayes_pls_golite062009
protein-cysteine S-palmitoleyltransferase activity	5.70902768432932	bayes_pls_golite062009
S-acyltransferase activity	2.42277624456482	bayes_pls_golite062009
palmitoyltransferase activity	2.39665981402803	bayes_pls_golite062009
SNAP receptor activity	2.23518960752054	bayes_pls_golite062009
clathrin binding	2.03985651011974	bayes_pls_golite062009
binding	1.76450203501026	bayes_pls_golite062009
transporter activity	1.71943098913274	bayes_pls_golite062009
substrate-specific transporter activity	0.939682472116899	bayes_pls_golite062009
hydrolase activity	0.815544630085919	bayes_pls_golite062009
signal recognition particle binding	0.66489873553532	bayes_pls_golite062009
protein binding	0.590936503990514	bayes_pls_golite062009
protein transporter activity	0.17469233791907	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.131410992694836	bayes_pls_golite062009
pyrophosphatase activity	0.0936690070284361	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.0846345824909659	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.0820309452260982	bayes_pls_golite062009

2

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.72

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle