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Protein Overview: IF5A1_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..158] PSI-BLAST 41.221849 Structural Analysis of Leishmania mexicana eukaryotic initiation factor 5a

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • U6 snRNA binding
  • 7.69488393698619 bayes_pls_golite062009
  • structural constituent of ribosome
  • 6.60650180781768 bayes_pls_golite062009
  • structural molecule activity
  • 6.0174879876147 bayes_pls_golite062009
  • translation initiation factor activity
  • 5.09596850944863 bayes_pls_golite062009
  • nucleic acid binding
  • 3.89165617439497 bayes_pls_golite062009
  • translation elongation factor activity
  • 3.58178742491041 bayes_pls_golite062009
  • DNA binding
  • 3.38561002225202 bayes_pls_golite062009
  • binding
  • 2.83465364476231 bayes_pls_golite062009
  • RNA binding
  • 1.76502371106766 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.74890841494748 bayes_pls_golite062009
  • transcription regulator activity
  • 1.69669059514663 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.54386990150255 bayes_pls_golite062009
  • translation regulator activity
  • 1.46320772716954 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 1.40718318783582 bayes_pls_golite062009
  • single-stranded DNA binding
  • 1.38349489974693 bayes_pls_golite062009
  • protein binding
  • 1.20309946451799 bayes_pls_golite062009
  • transcription activator activity
  • 0.990244702925461 bayes_pls_golite062009
  • mRNA binding
  • 0.883475899526061 bayes_pls_golite062009
  • transcription factor activity
  • 0.859071050218437 bayes_pls_golite062009
  • telomeric DNA binding
  • 0.594907498313479 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 0.474251377131502 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 0.47336621289748 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 0.47336621289748 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.39251242706379 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.39251242706379 bayes_pls_golite062009
  • ribonuclease activity
  • 0.35186207828037 bayes_pls_golite062009
  • nuclease activity
  • 0.26446253803519 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle