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Protein Overview: GS12_ARATH, GOS1...

General Information:
Name(s) found: GS12_ARATH [Swiss-Prot]
GOS12_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis thaliana] [NCBI NR]
  • gi|2583133|gb|AAB82642.1| putative cis-Golgi SNARE protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F84887 probable cis-Golgi SNARE protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15225431|ref|NP_182045.1| GOS12 (GOLGI SNARE 12); SNARE binding [Arabidopsis thaliana] [NCBI NR]
  • gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11132048|sp|O22151.1|GOS12_ARATH RecName: Full=Golgi SNARE 12 protein; Short=AtGOS12; AltName: Full=Golgi SNAP receptor complex member 1-2 [NCBI NR]
  • (O22151) Golgi SNARE 12 protein (AtGOS12) (Golgi SNAP receptor complex member 1-2) [Swiss-Prot]
  • Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=1 [Swiss-Prot]
  • putative cis-Golgi SNARE protein [Arabidopsis thaliana]gi|11132048|sp|O22151|GS12_ARATH Golgi SNARE 12 protein (AtGOS12) (Golgi SNAP receptor complex member 1-2)gi|13898895|gb|AAK48905.1| Golgi SNARE 12 protein [Arabidopsis thaliana]gi|25408932|pir||F8 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Golgi SNARE 12 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATGOS12, GOS12 | GOS12 (GOLGI SNARE 12); SNARE binding | chr2:18644763-18646714 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • GOS12 (GOLGI SNARE 12); SNARE binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Golgi SNARE 12 protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative cis-Golgi SNARE protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g45200 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Golgi SNARE 12 protein (AtGOS12) (Golgi SNAP receptor complex member 1-2) [nr-271106-contam.fasta]
  • | Symbols: GOS12, ATGOS12 | golgi snare 12 | chr2:18637689-18639640 REVERSE LENGTH=239 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana GN=GOS12 [ARATH-contam.fasta]
  • Isoform of O22151, Isoform 2 of Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana GN=GOS12 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 239 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [TAS]
    cytosol [IDA]
    vacuole [IDA]
    Biological Process: cellular membrane fusion [IPI]
    intra-Golgi vesicle-mediated transport [TAS]
    Molecular Function: SNARE binding [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESSLDLQE SGWEELRREA RKIEGDLDVK LSSYAKLGAR FTQGGYVDTG SPTVGSGRSW  60
   61 KSMEMEIQSL LEKLLDINDS MSRCAASAAP TTSVTQKLAR HRDILHEYTQ EFRRIKGNIN 120
  121 SLREHAELLS SVRDDISEYK ASGSMSPGVQ VLRERASIHG SISHIDDVIG QAQATRAVLG 180
  181 SQRSLFSDVQ GKVKNLGDKF PVIRGLLGSI KRKRSRDTLI LSAVIAACTL FLIIYWLSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 6.0 Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
    2 View Details [136..239] PSI-BLAST 6.045757 No description for 2npsC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphatidic acid binding
    		•  4.70756950563167 bayes_pls_golite062009
  • SNAP receptor activity
    		•  3.50393203740159 bayes_pls_golite062009
  • protein transporter activity
    		•  2.305772311362 bayes_pls_golite062009
  • protein binding
    		•  2.01524199895183 bayes_pls_golite062009
  • binding
    		•  1.88170908543488 bayes_pls_golite062009
  • myosin head/neck binding
    		•  1.76421579737303 bayes_pls_golite062009
  • transporter activity
    		•  1.74189664015129 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.49085442233849 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.13101548288086 bayes_pls_golite062009
  • SNARE binding
    		•  0.71459772253941 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.643064875848901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.370484918396857 bayes_pls_golite062009
  • channel activity
    		•  0.0647076360772156 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.0647076360772156 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.0435980899803177 bayes_pls_golite062009
  • calcium channel inhibitor activity
    		•  0.0422996980911705 bayes_pls_golite062009
  • phospholipid binding
    		•  0.0172309833091902 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle