YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GS12_ARATH, GOS1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESSLDLQE SGWEELRREA RKIEGDLDVK LSSYAKLGAR FTQGGYVDTG SPTVGSGRSW  60
   61 KSMEMEIQSL LEKLLDINDS MSRCAASAAP TTSVTQKLAR HRDILHEYTQ EFRRIKGNIN 120
  121 SLREHAELLS SVRDDISEYK ASGSMSPGVQ VLRERASIHG SISHIDDVIG QAQATRAVLG 180
  181 SQRSLFSDVQ GKVKNLGDKF PVIRGLLGSI KRKRSRDTLI LSAVIAACTL FLIIYWLSK

Type	Start	End	Confidence
Cytoplasmic	1	217	0.91
Transmembrane Helix	218	237	0.96
Non-Cytoplasmic	238	239	0.75