Protein Overview: GS12_ARATH, GOS1...

General Information:
Name(s) found:	GS12_ARATH [Swiss-Prot] GOS12_ARATH [Swiss-Prot]
Description(s) found: Found 19 descriptions. SHOW ALL	(O22151) Golgi SNARE 12 protein (AtGOS12) (Golgi SNAP receptor complex member 1-2) [Swiss-Prot] Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	239 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [TAS] cytosol [IDA] vacuole [IDA]
Biological Process:	cellular membrane fusion [IPI] intra-Golgi vesicle-mediated transport [TAS]
Molecular Function:	SNARE binding [TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESSLDLQE SGWEELRREA RKIEGDLDVK LSSYAKLGAR FTQGGYVDTG SPTVGSGRSW  60
   61 KSMEMEIQSL LEKLLDINDS MSRCAASAAP TTSVTQKLAR HRDILHEYTQ EFRRIKGNIN 120
  121 SLREHAELLS SVRDDISEYK ASGSMSPGVQ VLRERASIHG SISHIDDVIG QAQATRAVLG 180
  181 SQRSLFSDVQ GKVKNLGDKF PVIRGLLGSI KRKRSRDTLI LSAVIAACTL FLIIYWLSK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..135]	PSI-BLAST	6.0	Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
2	View Details	[136..239]	PSI-BLAST	6.045757	No description for 2npsC was found.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
phosphatidic acid binding	4.70756950563167	bayes_pls_golite062009
SNAP receptor activity	3.50393203740159	bayes_pls_golite062009
protein transporter activity	2.305772311362	bayes_pls_golite062009
protein binding	2.01524199895183	bayes_pls_golite062009
binding	1.88170908543488	bayes_pls_golite062009
myosin head/neck binding	1.76421579737303	bayes_pls_golite062009
transporter activity	1.74189664015129	bayes_pls_golite062009
substrate-specific transporter activity	1.49085442233849	bayes_pls_golite062009
transmembrane transporter activity	1.13101548288086	bayes_pls_golite062009
SNARE binding	0.71459772253941	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.643064875848901	bayes_pls_golite062009
ion transmembrane transporter activity	0.370484918396857	bayes_pls_golite062009
channel activity	0.0647076360772156	bayes_pls_golite062009
passive transmembrane transporter activity	0.0647076360772156	bayes_pls_golite062009
substrate-specific channel activity	0.0435980899803177	bayes_pls_golite062009
calcium channel inhibitor activity	0.0422996980911705	bayes_pls_golite062009
phospholipid binding	0.0172309833091902	bayes_pls_golite062009

2

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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