| Protein: | GS12_ARATH, GOS1... |
| Organism: | Arabidopsis thaliana |
| Length: | 239 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GS12_ARATH, GOS1....
| Description | E-value | Query Range |
Subject Range |
|
|
171.0 | [0..10] | [237..6] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MTESSLDLQE SGWEELRREA RKIEGDLDVK LSSYAKLGAR FTQGGYVDTG SPTVGSGRSW 60
61 KSMEMEIQSL LEKLLDINDS MSRCAASAAP TTSVTQKLAR HRDILHEYTQ EFRRIKGNIN 120
121 SLREHAELLS SVRDD
|
| Detection Method: |  |
| Confidence: | 6.0 |
| Match: | 1vcsA |
| Description: | Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus] |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphatidic acid binding | 4.70756950563167 | bayes_pls_golite062009 |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| protein transporter activity | 2.305772311362 | bayes_pls_golite062009 |
| protein binding | 2.01524199895183 | bayes_pls_golite062009 |
| binding | 1.88170908543488 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.76421579737303 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| SNARE binding | 0.71459772253941 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| calcium channel inhibitor activity | 0.0422996980911705 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
|
Region A: Residues: [136-239] |
1 11 21 31 41 51
| | | | | |
1 ISEYKASGSM SPGVQVLRER ASIHGSISHI DDVIGQAQAT RAVLGSQRSL FSDVQGKVKN 60
61 LGDKFPVIRG LLGSIKRKRS RDTLILSAVI AACTLFLIIY WLSK
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 2npsC |
| Description: | No description for 2npsC was found. |
