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Protein Overview: DRP1A_ARATH

General Information:
Name(s) found: DRP1A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9757953|dbj|BAB08441.1| dynamin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|807577|gb|AAA84446.1| GTP-binding protein [NCBI NR]
  • gi|30693985|ref|NP_851120.1| ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|27735181|sp|P42697.3|DRP1A_ARATH RecName: Full=Dynamin-related protein 1A; AltName: Full=Dynamin-like protein A; AltName: Full=Dynamin-like protein 1 [NCBI NR]
  • pir||S59558 dynamin-like protein - Arabidopsis thaliana [NCBI NR]
  • (P42697) Dynamin-like protein [Swiss-Prot]
  • Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3 [Swiss-Prot]
  • dynamin-like protein [Arabidopsis thaliana]gi|2129608|pir||S59558 dynamin-like protein - Arabidopsis thalianagi|30693985|ref|NP_851120.1| GTP-binding protein / phragmoplastin, putative [Arabidopsis thaliana]gi|807577|gb|AAA84446.1| GTP-binding protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 1 of Dynamin-related protein 1A [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ADL1A, AG68, DRP1A | ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding | chr5:16837889-16841764 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • GTP-binding protein [nr-271106-contam.fasta]
  • dynamin-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dynamin-related protein 1A (Dynamin-like protein A) (Dynamin-like protein 1) [nr-271106-contam.fasta]
  • ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9, DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=610 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    cell plate [IDA]
    plasma membrane [IDA]
    microtubule [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: embryonic development ending in seed dormancy [IGI]
    synaptic vesicle endocytosis [IDA]
    xylem and phloem pattern formation [IMP]
    cytokinesis by cell plate formation [IGI]
    trichome branching [IMP]
    cell plate formation involved in plant-type cell wall biogenesis [IGI]
    Molecular Function: GTP binding [ISS]
    protein binding [IPI]
    GTPase activity [IDA]
    clathrin binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL  60
   61 PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF AAVRKEIQDE TDRETGRSKA 120
  121 ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI 180
  181 SPANQDLATS DAIKISREVD PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV 240
  241 VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP 300
  301 GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV 360
  361 YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL IAPEQGYRRL IESSIVSIRG 420
  421 PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV 480
  481 DMECSYLTVD FFRKLPQDVE KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI 540
  541 PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ 600
  601 SEIDAVAWSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 102.0 Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
    2 View Details [325..506] Pfam 32.376751 No description for PF01031.11 was found. No confident structure predictions are available.
    3 View Details [507..610] Pfam 39.958607 No description for PF02212.9 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • protein binding
    		•  1.22129154759482 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.777787753097919 bayes_pls_golite062009
  • DNA binding
    		•  0.479412476059825 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.442941451960958 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.440672169804309 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.440612929099368 bayes_pls_golite062009
  • nucleotide binding
    		•  0.433111366205869 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.312171320541728 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle